Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 ATP5LP2-201ENST00000440646 311 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC068135.1-201ENST00000446164 246 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 PTENP1-201ENST00000447117 1215 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC097463.1-201ENST00000447288 481 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX18Q96RF0 USP9YP25-201ENST00000457708 443 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC023194.2-201ENST00000465398 406 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC004815.1-201ENST00000484185 331 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC008629.2-201ENST00000503783 483 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC118282.2-201ENST00000508739 374 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC092593.2-201ENST00000513866 913 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 RN7SKP238-201ENST00000516483 249 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 MIR2117-201ENST00000516780 80 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC006518.2-201ENST00000542513 940 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC008126.1-201ENST00000549019 480 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AL513327.3-201ENST00000602618 469 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AL133507.1-201ENST00000605269 557 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC012557.2-201ENST00000605919 418 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC011374.2-201ENST00000607135 526 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AL136131.3-201ENST00000607600 188 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC024023.1-201ENST00000624530 922 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC073488.3-201ENST00000631611 778 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX18Q96RF0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX18Q96RF0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 AL078621.3-201ENST00000623707 2042 ntBASIC5.26□□□□□ -1.57
SNX18Q96RF0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX18Q96RF0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX18Q96RF0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SNX18Q96RF0 PROS2P-201ENST00000474651 1951 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 Y_RNA.318-201ENST00000365131 97 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX18Q96RF0 RNU6-1263P-201ENST00000384601 106 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 SNORD65C-201ENST00000390962 71 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 RNU6-244P-201ENST00000391028 104 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 SFR1P1-201ENST00000403720 688 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC016739.1-201ENST00000405359 345 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 HNRNPDP2-201ENST00000406475 478 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 MIR1302-8-201ENST00000408342 128 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 HMGN1P20-201ENST00000411849 300 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 CTSL3P-202ENST00000412179 788 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 HMGB3P31-201ENST00000413333 595 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 BTF3P8-201ENST00000414577 526 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 MORF4L1P6-201ENST00000418771 268 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC016907.1-201ENST00000419483 435 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 RNGTTP1-201ENST00000420965 728 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC090960.1-201ENST00000421072 306 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 RPS3P2-201ENST00000421346 701 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC246680.2-201ENST00000422106 389 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 RPS12P17-201ENST00000438591 377 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 PPIAP27-201ENST00000453800 265 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 HLA-DPA3-207ENST00000454398 229 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC244505.3-201ENST00000454598 187 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.25□□□□□ -1.57
SNX18Q96RF0 RNU1-88P-201ENST00000459274 128 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC006539.1-201ENST00000481419 501 ntBASIC5.25□□□□□ -1.57
SNX18Q96RF0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms