Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TCEA1P1-201ENST00000449716 880 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 AL591623.2-201ENST00000449978 222 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 AC108751.2-201ENST00000469993 231 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 ARL4AP1-201ENST00000503220 705 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 RNA5SP43-201ENST00000516559 110 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 AC025423.2-201ENST00000537570 439 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL21A1Q96P44 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 LINC01355-201ENST00000566551 5444 ntBASIC4.62□□□□□ -1.67
COL21A1Q96P44 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.62□□□□□ -1.67
COL21A1Q96P44 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL21A1Q96P44 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AP001273.1-201ENST00000624493 3152 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 RNA5SP428-201ENST00000365129 132 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AL021331.1-201ENST00000402817 582 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 AL136116.2-201ENST00000404020 785 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL21A1Q96P44 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AL137845.2-201ENST00000444292 988 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL21A1Q96P44 RN7SL515P-201ENST00000463999 297 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 RN7SL808P-201ENST00000496066 299 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 EIF1P5-201ENST00000585002 234 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC104687.2-201ENST00000604442 342 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 AL445222.1-201ENST00000607259 628 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC004948.1-201ENST00000609858 672 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 MIR7155-201ENST00000615925 56 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 AL049794.2-201ENST00000616301 365 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 AC068870.2-201ENST00000620635 389 ntBASIC4.61□□□□□ -1.67
COL21A1Q96P44 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL21A1Q96P44 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COL21A1Q96P44 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 DHX9P1-201ENST00000436565 3076 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC000123.3-201ENST00000624029 4975 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AL645927.1-201ENST00000396783 406 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AP002530.1-201ENST00000405705 684 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC234781.4-201ENST00000419384 244 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 CKS1BP6-201ENST00000424932 240 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 RBMY2QP-201ENST00000429799 1147 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC092162.1-201ENST00000432828 434 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 NMNAT1P2-201ENST00000435192 860 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 RHOT1P3-201ENST00000436571 331 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 PTMAP6-201ENST00000439110 327 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 SCAND3P1-201ENST00000439854 1060 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 MRPL48P1-201ENST00000445390 636 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 MTND6P5-201ENST00000448266 512 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 RHEBP2-201ENST00000450289 600 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms