Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 HIGD1AP8-201ENST00000453927 274 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 RPL35AP28-201ENST00000459730 331 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 RN7SKP260-201ENST00000516907 149 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 MIR4700-201ENST00000578311 74 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 AL353662.3-201ENST00000625131 237 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC097461.1-201ENST00000568928 2821 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC103591.2-201ENST00000265259 766 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 RNA5SP123-201ENST00000363244 119 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 RNU1-83P-201ENST00000363426 164 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 MIR585-201ENST00000384887 94 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 GJA6P-201ENST00000415117 1042 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 OR13Z1P-201ENST00000416141 834 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 RBMY2KP-201ENST00000418221 992 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 TDGF1P1-201ENST00000445734 527 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 KNOP1P3-201ENST00000446933 426 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 HMGN2P25-201ENST00000486956 268 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 RNU6-943P-201ENST00000516960 98 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 OR5AZ1P-201ENST00000527448 943 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AL445528.2-201ENST00000620582 470 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AC012414.7-202ENST00000622705 1090 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 AP003072.5-201ENST00000623872 773 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 NXF4-202ENST00000416098 1465 ntBASIC4.98□□□□□ -1.61
C9orf72Q96LT7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
C9orf72Q96LT7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 CR382285.2-201ENST00000624662 1495 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 RN7SKP104-201ENST00000362605 328 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AL357515.1-201ENST00000402967 542 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 U3.35-201ENST00000408405 208 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 RN7SKP97-201ENST00000410966 333 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AL139128.1-201ENST00000413921 941 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 FABP7P1-201ENST00000424004 391 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 RPL34P20-201ENST00000442771 351 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 NDUFA5P8-201ENST00000449019 346 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AC087783.2-201ENST00000605070 562 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AC005377.1-201ENST00000605126 456 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AL161912.3-201ENST00000605404 628 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AL356752.1-201ENST00000615844 593 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AC091905.4-201ENST00000623432 202 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 AP001784.1-201ENST00000624107 428 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.97□□□□□ -1.61
C9orf72Q96LT7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf72Q96LT7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
C9orf72Q96LT7 INTS6P1-201ENST00000504674 2530 ntBASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms