Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
VMP1Q96GC9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VMP1Q96GC9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 OR4F13P-202ENST00000560066 2054 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 SNORA51.1-201ENST00000363243 140 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 RNA5SP241-201ENST00000391326 114 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 MTND4LP14-201ENST00000429447 288 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC012075.1-201ENST00000436549 580 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 MED6P1-201ENST00000439659 713 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC019185.1-201ENST00000442718 389 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 TPMTP4-201ENST00000450749 678 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC100832.1-201ENST00000471945 383 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 RN7SL583P-201ENST00000475692 287 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 ATP5LP3-201ENST00000514223 304 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 HMGB1P19-201ENST00000517578 577 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC005242.1-201ENST00000585658 438 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC079395.2-201ENST00000610982 737 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 MIR8080-201ENST00000622224 89 ntBASIC5.17□□□□□ -1.58
VMP1Q96GC9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
VMP1Q96GC9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
VMP1Q96GC9 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VMP1Q96GC9 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VMP1Q96GC9 OR5T3-201ENST00000303059 1023 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 IGKV7-3-201ENST00000357453 298 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 RNA5SP326-201ENST00000363209 110 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 RN7SKP160-201ENST00000363804 340 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VMP1Q96GC9 NPM1P10-201ENST00000398310 865 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 RNU4-74P-201ENST00000411280 161 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 SPRYD7P1-201ENST00000443861 570 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VMP1Q96GC9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 OR52A4P-201ENST00000472867 958 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 AC010683.1-201ENST00000473673 378 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 RN7SL214P-201ENST00000487317 265 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 EIF1P7-201ENST00000487533 337 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 AC108693.1-201ENST00000496068 432 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 BX510359.5-201ENST00000515651 304 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 SNORD116-26-201ENST00000516006 96 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 RN7SKP253-201ENST00000516424 309 ntBASIC5.16□□□□□ -1.58
VMP1Q96GC9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.16□□□□□ -1.58
VMP1Q96GC9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms