Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.07□□□□□ -1.44
HPS3Q969F9 RNU4-5P-201ENST00000607255 135 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AL139124.1-201ENST00000609123 421 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AC010632.3-201ENST00000611377 369 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AC087683.2-201ENST00000611384 326 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 RNA5SP440-201ENST00000612665 119 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AC007786.3-201ENST00000615154 596 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AC127024.6-201ENST00000621598 424 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AC139713.2-210ENST00000641741 992 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 AC073869.8-201ENST00000641806 335 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.07□□□□□ -1.44
HPS3Q969F9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.07□□□□□ -1.44
HPS3Q969F9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
HPS3Q969F9 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 VN2R3P-201ENST00000422626 1412 ntBASIC6.07□□□□□ -1.44
HPS3Q969F9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
HPS3Q969F9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HPS3Q969F9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HPS3Q969F9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HPS3Q969F9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HPS3Q969F9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HPS3Q969F9 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HPS3Q969F9 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HPS3Q969F9 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.06□□□□□ -1.44
HPS3Q969F9 RN7SKP6-201ENST00000364795 319 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HPS3Q969F9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 OR2AT2P-201ENST00000413438 905 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 VTA1P1-201ENST00000414044 866 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AC009506.2-201ENST00000420635 840 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AC009784.1-201ENST00000426484 460 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.06□□□□□ -1.44
HPS3Q969F9 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.06□□□□□ -1.44
HPS3Q969F9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 YWHAEP1-201ENST00000453697 763 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HPS3Q969F9 RN7SL188P-201ENST00000469842 285 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AC005412.2-201ENST00000492004 341 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 EEF1A1P37-201ENST00000522748 715 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 OR4A43P-201ENST00000532938 908 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.06□□□□□ -1.44
HPS3Q969F9 H3F3BP2-201ENST00000583907 357 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 AC108738.1-201ENST00000603703 237 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AC096586.1-201ENST00000610267 561 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 PART1_2.1-201ENST00000612397 250 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AL121890.3-201ENST00000618494 516 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 MIR6886-201ENST00000619864 61 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AC132068.1-201ENST00000623805 459 ntBASIC6.06□□□□□ -1.44
HPS3Q969F9 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HPS3Q969F9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.06□□□□□ -1.44
HPS3Q969F9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.06□□□□□ -1.44
HPS3Q969F9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HPS3Q969F9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HPS3Q969F9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
HPS3Q969F9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.06□□□□□ -1.44
HPS3Q969F9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HPS3Q969F9 AC026523.2-201ENST00000625039 7739 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.05□□□□□ -1.44
HPS3Q969F9 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 MTCO1P15-201ENST00000529569 1526 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
HPS3Q969F9 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HPS3Q969F9 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.05□□□□□ -1.44
HPS3Q969F9 RNA5SP234-201ENST00000363916 119 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 SNORD56.6-201ENST00000384569 71 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 HMGB3P7-201ENST00000400214 611 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 OR4K12P-201ENST00000406538 961 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 GAPDHP42-201ENST00000406848 981 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 RN7SKP199-201ENST00000410325 305 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AL592310.1-201ENST00000414330 671 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 TNPO1P1-201ENST00000423641 1138 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AC073909.1-201ENST00000447112 999 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.05□□□□□ -1.44
HPS3Q969F9 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HPS3Q969F9 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms