Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 RNY3P9-201ENST00000384727 106 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 GAPDHP15-201ENST00000398586 975 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 RN7SKP126-201ENST00000411143 300 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 RNU4-74P-201ENST00000411280 161 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC119751.6-201ENST00000416712 186 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC005005.2-201ENST00000420779 380 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC006065.1-201ENST00000422539 802 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC092648.1-201ENST00000425870 423 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC097721.1-201ENST00000427150 1253 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 VN1R25P-201ENST00000443385 738 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 OR13K1P-201ENST00000444577 975 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC026979.1-201ENST00000492525 396 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC026414.1-201ENST00000504046 698 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 MTCYBP19-201ENST00000517463 1124 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 ZNF971P-201ENST00000562068 1249 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 RBM22P1-201ENST00000578589 1214 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC079395.3-201ENST00000615161 484 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 TCL6_3.1-201ENST00000619064 137 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 AC019226.2-201ENST00000625973 424 ntBASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 THAP12P9-201ENST00000503971 2360 ntBASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.35
SMC1BQ8NDV3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC105749.1-201ENST00000631338 2008 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 RNU6-906P-201ENST00000384700 70 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 MTCO2P31-201ENST00000402702 684 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 RNU2-50P-201ENST00000410494 143 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC017078.1-201ENST00000416146 368 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AL096803.2-201ENST00000450032 677 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC005412.1-201ENST00000580812 1049 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 VN1R87P-201ENST00000596706 487 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC020910.2-201ENST00000603635 610 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC113368.1-201ENST00000603736 382 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AL355493.4-201ENST00000618530 292 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AL035461.2-201ENST00000619201 524 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms