Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 DISC2.1-201ENST00000612827 205 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC099654.6-201ENST00000636487 512 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 LINC00622-201ENST00000562811 1570 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 AC007485.2-201ENST00000623493 1667 ntBASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.93□□□□□ -1.3
DEPDC4Q8N2C3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 ZNF300P1-201ENST00000356555 1822 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC006210.2-201ENST00000367074 1545 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL078604.1-201ENST00000404609 466 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL133384.1-201ENST00000412744 351 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 RPS10P21-201ENST00000430654 475 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC092601.1-201ENST00000444526 383 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 DEFA11P-201ENST00000446470 261 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 SBDSP1-204ENST00000453858 737 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 MED28P8-201ENST00000454831 521 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 RPL7P22-201ENST00000466005 733 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 RN7SL12P-201ENST00000473849 290 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 RN7SL314P-201ENST00000490735 292 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC034222.1-201ENST00000494052 532 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 SUMO2P7-201ENST00000511179 285 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC024405.1-201ENST00000532521 1042 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC115085.1-201ENST00000588924 229 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL162730.1-201ENST00000605734 292 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL096855.2-201ENST00000605785 369 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 COX6CP4-201ENST00000605798 228 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AL450226.2-201ENST00000622913 439 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC009161.2-201ENST00000624626 138 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC010653.3-201ENST00000635332 232 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 U6.101-201ENST00000637707 76 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 AC183089.2-201ENST00000637931 916 ntBASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DEPDC4Q8N2C3 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC005839.1-201ENST00000624148 3213 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC016745.2-201ENST00000608834 3443 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms