Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 AL356981.1-201ENST00000454879 684 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 RNU7-157P-201ENST00000459600 66 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 RN7SL354P-201ENST00000469282 294 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC078857.1-201ENST00000469870 667 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 RPL23AP72-201ENST00000492447 435 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC140172.1-201ENST00000502928 141 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 MTCO2P9-201ENST00000503214 694 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 RN7SKP260-201ENST00000516907 149 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 OR7E128P-201ENST00000532736 1024 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AP006289.1-201ENST00000538089 277 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC068620.3-201ENST00000602749 560 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC080013.6-201ENST00000606185 215 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AL355802.4-201ENST00000607635 548 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 uc_338.7-201ENST00000621834 124 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE4Q8N205 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE4Q8N205 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC009962.1-201ENST00000567327 3813 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC079298.1-201ENST00000625026 1619 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 CCNB2P1-201ENST00000399411 1150 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 RNU2-50P-201ENST00000410494 143 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 MTCO2P21-201ENST00000419780 677 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC017019.1-201ENST00000426129 261 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 USP9YP28-201ENST00000435142 589 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC112498.1-201ENST00000444401 332 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 PSAT1P4-201ENST00000466500 526 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC090589.1-201ENST00000473109 362 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC104982.1-201ENST00000478775 574 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 RN7SL244P-201ENST00000493405 297 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 COX6B1P5-201ENST00000509843 249 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 MRPS36P5-201ENST00000551909 298 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 MIR1254-2-201ENST00000579553 63 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 MTCO2P2-201ENST00000591258 225 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 MIR6780A-201ENST00000615089 68 ntBASIC6.41□□□□□ -1.38
SYNE4Q8N205 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNE4Q8N205 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNE4Q8N205 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC092570.3-201ENST00000420113 693 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 RPL12P43-201ENST00000420608 499 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms