Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL022401.1-201ENST00000619498 108 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 AC112694.2-201ENST00000623697 768 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 CR381572.2-201ENST00000624852 397 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC65Q8IXS2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
CCDC65Q8IXS2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CCDC65Q8IXS2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC65Q8IXS2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC65Q8IXS2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC65Q8IXS2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC65Q8IXS2 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AL034370.1-201ENST00000397254 1590 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 GAPDHP15-201ENST00000398586 975 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 SPTLC1P2-201ENST00000407089 121 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 RGS17P1-201ENST00000423358 553 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 EIF4HP2-201ENST00000424380 563 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC093414.1-201ENST00000434712 514 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC112498.1-201ENST00000444401 332 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 TRY2P-201ENST00000448860 689 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 NPM1P39-201ENST00000449818 867 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 RN7SL558P-201ENST00000497468 299 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 RNA5SP392-201ENST00000516905 112 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC011487.3-201ENST00000593607 453 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AL121932.1-201ENST00000605542 214 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC131238.1-201ENST00000617135 328 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC006453.5-201ENST00000636451 619 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC245100.2-201ENST00000454544 1679 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AL022393.1-201ENST00000625142 1677 ntBASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC65Q8IXS2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 DDX18P3-201ENST00000404856 2007 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 RNA5SP123-201ENST00000363244 119 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 HMGB3P7-201ENST00000400214 611 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 RPL12P43-201ENST00000420608 499 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AL358176.3-201ENST00000420757 454 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AL451139.1-201ENST00000434718 346 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AC110749.1-201ENST00000462007 357 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 OR5M14P-201ENST00000506803 618 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AF186190.1-201ENST00000517470 480 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AC020910.3-201ENST00000603701 874 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AL445222.1-201ENST00000607259 628 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 INTS6P1-201ENST00000504674 2530 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 CASC19-206ENST00000641028 1430 ntBASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC65Q8IXS2 SMG1P6-201ENST00000532337 2930 ntBASIC5.37□□□□□ -1.55
CCDC65Q8IXS2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC65Q8IXS2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC65Q8IXS2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms