Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 AC007485.2-201ENST00000623493 1667 ntBASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 AC109315.1-201ENST00000584143 1347 ntBASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS3Q8IXF0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC011008.2-201ENST00000624866 3352 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC009166.2-201ENST00000624410 2833 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 RPL24P7-201ENST00000399435 453 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 RNU6-195P-201ENST00000411352 109 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 MTND4LP17-201ENST00000414607 293 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 VDAC1P6-201ENST00000430062 855 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 LSM3P3-201ENST00000436601 306 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 RABEPKP1-201ENST00000440529 1026 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 RN7SL654P-201ENST00000479178 292 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 RPL37P23-201ENST00000492641 294 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC027801.3-201ENST00000515049 698 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 RN7SKP196-201ENST00000516267 345 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 RN7SKP70-201ENST00000516655 271 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 KCTD9P4-201ENST00000526766 1166 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AP001004.1-201ENST00000582468 324 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AL391646.1-201ENST00000603860 190 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC007938.3-201ENST00000604965 623 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC005514.1-201ENST00000623521 208 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 CASC19-212ENST00000641153 1287 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 AC138393.1-206ENST00000540997 1886 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 GDI2P1-201ENST00000429312 1336 ntBASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
NPAS3Q8IXF0 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS3Q8IXF0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms