Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC28Q86X40 ATP5J2P6-201ENST00000565203 266 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 MIR4443-201ENST00000585052 53 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC096553.1-201ENST00000605169 829 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AL445222.1-201ENST00000607259 628 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AP005432.2-201ENST00000608162 586 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 CASC19-222ENST00000641321 1173 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC28Q86X40 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC28Q86X40 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC28Q86X40 AL592182.3-201ENST00000642132 3304 ntBASIC4.34□□□□□ -1.72
LRRC28Q86X40 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC28Q86X40 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC28Q86X40 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LRRC28Q86X40 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC009643.2-201ENST00000603543 1448 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 RNU1-94P-201ENST00000362627 173 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 AL672167.2-201ENST00000377164 879 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 MIR195-201ENST00000385194 87 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 LRRC37BP1-201ENST00000398851 714 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 VDAC1P9-201ENST00000412766 841 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC013470.3-201ENST00000420252 1194 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 RGS17P1-201ENST00000423358 553 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 PPIAP13-201ENST00000434706 478 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC073052.1-201ENST00000440417 714 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 KNOP1P3-201ENST00000446933 426 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 MTND6P5-201ENST00000448266 512 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 RN7SL610P-201ENST00000463845 291 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 RN7SL443P-201ENST00000464331 290 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC090114.3-201ENST00000479267 829 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 RN7SL97P-201ENST00000486780 299 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC104971.1-201ENST00000495117 578 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC018552.1-201ENST00000562099 811 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC004232.3-201ENST00000622977 525 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 AC005086.4-201ENST00000623065 213 ntBASIC4.33□□□□□ -1.72
LRRC28Q86X40 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC28Q86X40 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 SNORA68.2-201ENST00000391263 128 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 CHMP1B2P-201ENST00000399581 597 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC004690.1-201ENST00000418216 328 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 DDX39BP1-205ENST00000422507 192 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC092647.3-201ENST00000443044 633 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 RPS4XP18-201ENST00000495480 763 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 RN7SL808P-201ENST00000496066 299 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 RN7SKP260-201ENST00000516907 149 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC013701.1-201ENST00000522657 465 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms