Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC239809.1-201ENST00000450470 217 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 GAPDHP14-201ENST00000450472 937 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 OR2AF1P-201ENST00000454899 889 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC092754.1-201ENST00000472975 479 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 HMGB1P40-201ENST00000525121 540 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AP003049.1-201ENST00000529418 457 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC084757.1-201ENST00000559987 490 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 MIR4716-201ENST00000579628 84 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 KATNBL1P5-201ENST00000605015 517 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AP000864.1-201ENST00000609424 650 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC022467.1-201ENST00000614738 749 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC016957.2-201ENST00000616998 848 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 CASC19-222ENST00000641321 1173 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 CASC19-264ENST00000641912 1184 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AL592437.2-201ENST00000421655 2434 ntBASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP54Q7Z3B4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 MTCO1P11-201ENST00000429111 1528 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC022893.2-201ENST00000564832 3296 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 SNORA51.1-201ENST00000363243 140 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 MIR323B-201ENST00000385269 82 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AL133388.1-201ENST00000404509 287 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AL391361.1-201ENST00000405580 489 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 RNA5SP487-201ENST00000410186 122 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 RN7SKP59-201ENST00000410520 314 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AL390774.1-201ENST00000411924 246 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 CFL1P1-202ENST00000432948 411 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 CYCSP6-201ENST00000434498 302 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AL513321.1-201ENST00000441175 761 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC006326.1-201ENST00000445465 787 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 IFNWP4-201ENST00000453148 294 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 RPL7P40-201ENST00000481703 745 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 RN7SL591P-201ENST00000496150 292 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC021193.1-201ENST00000511607 420 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 SCARNA20.4-201ENST00000516969 131 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC103833.1-201ENST00000517442 172 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC022360.1-201ENST00000521058 340 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 NOP56P3-201ENST00000549457 385 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC023158.1-201ENST00000561632 1025 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC135178.6-201ENST00000605314 398 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AL008729.2-201ENST00000606393 473 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC004775.1-201ENST00000607389 753 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC109583.2-201ENST00000617367 129 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC138965.3-201ENST00000623875 498 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AC097372.4-201ENST00000625025 466 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 BMS1P21-201ENST00000634565 365 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms