Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC027279.1-201ENST00000568885 4284 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AL669831.5-218ENST00000591702 1873 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC005332.4-201ENST00000592752 579 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 OR7A8P-201ENST00000595427 913 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC068768.2-201ENST00000602352 343 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AP002364.1-201ENST00000623330 3386 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC117529.2-201ENST00000512159 2068 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC079298.1-201ENST00000625026 1619 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 MTCO1P23-201ENST00000415223 1526 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 CR383658.2-201ENST00000547576 1525 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC017007.4-201ENST00000503353 1352 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 RNU6-877P-201ENST00000383868 107 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 RNA5SP284-201ENST00000384547 118 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 TRAV35-201ENST00000390462 330 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 NCOR1P3-201ENST00000420479 303 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC069157.1-201ENST00000421749 137 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC130360.1-201ENST00000425489 1117 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 DEFA9P-201ENST00000433042 285 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 BX842559.2-201ENST00000451418 605 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 CFL1P4-201ENST00000451536 498 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 VPS25P1-201ENST00000455691 508 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 RN7SL177P-201ENST00000476596 299 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 RPL34P33-201ENST00000486062 334 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 MTND6P8-201ENST00000503471 522 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 DUTP7-201ENST00000507982 486 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC083906.1-201ENST00000509298 406 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC130365.2-201ENST00000525882 1201 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 MTND1P35-201ENST00000526739 508 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 CBX3P5-201ENST00000552017 521 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 MIR4443-201ENST00000585052 53 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AP001542.2-201ENST00000593141 364 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AL157899.1-201ENST00000604110 936 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC099676.1-201ENST00000608886 657 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AL031658.2-201ENST00000616850 651 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 AC034111.1-201ENST00000562143 3770 ntBASIC8.15□□□□□ -1.1
RC3H1Q5TC82 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RC3H1Q5TC82 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.15□□□□□ -1.11
RC3H1Q5TC82 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RC3H1Q5TC82 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RC3H1Q5TC82 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
RC3H1Q5TC82 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RC3H1Q5TC82 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
RC3H1Q5TC82 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RC3H1Q5TC82 UGT2B25P-201ENST00000511504 1586 ntBASIC8.14□□□□□ -1.11
RC3H1Q5TC82 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RC3H1Q5TC82 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RC3H1Q5TC82 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.14□□□□□ -1.11
RC3H1Q5TC82 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms