Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 NPM1P17-201ENST00000479221 602 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 RPSAP50-201ENST00000481955 852 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 ATP5LP5-201ENST00000483050 299 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 RN7SL97P-201ENST00000486780 299 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC068339.2-201ENST00000534395 618 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 GLRXP2-201ENST00000555594 321 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC025918.2-201ENST00000558683 763 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC021483.2-201ENST00000567415 758 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 DPRXP4-201ENST00000578053 568 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 MIR4436B2-201ENST00000581415 91 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 MIR4436B1-201ENST00000583272 91 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 MIR7853-201ENST00000584820 132 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 MIR6809-201ENST00000612189 116 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 uc_338.18-201ENST00000615451 175 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC009704.2-201ENST00000618739 483 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AL445528.2-201ENST00000620582 470 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 MIR6837-201ENST00000620884 64 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AP000756.2-201ENST00000624168 2567 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 OR4F13P-202ENST00000560066 2054 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM3Q53GG5 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 OR4K17-201ENST00000315543 1032 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 SNORA64.1-201ENST00000362600 132 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 RNU6-225P-201ENST00000384613 103 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 TAF9BP2-201ENST00000400856 499 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 RN7SKP247-201ENST00000411094 308 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 CACYBPP1-201ENST00000438592 684 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 MTND6P18-201ENST00000439477 513 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AL359265.1-201ENST00000440296 795 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 RPL5P25-201ENST00000441148 775 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 RPS11P7-201ENST00000442125 465 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 MOB1AP2-201ENST00000446060 614 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 LRRC37A14P-201ENST00000452297 462 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 PSAT1P4-201ENST00000466500 526 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 RPL7P39-201ENST00000481157 744 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC099521.1-201ENST00000482557 334 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AP003102.1-201ENST00000525638 661 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 PCNAP4-201ENST00000532690 730 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 DHFRP1-201ENST00000579682 559 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 MIR4776-2-201ENST00000580204 80 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 MIR4646-201ENST00000580775 63 ntBASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM3Q53GG5 AL021918.2-201ENST00000613415 194 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms