Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MTND5P23-201ENST00000430812 1655 ntBASIC5.5□□□□□ -1.53
USP41Q3LFD5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP41Q3LFD5 AC073136.1-201ENST00000449426 2884 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP41Q3LFD5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP41Q3LFD5 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP41Q3LFD5 Z97832.1-201ENST00000402490 328 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 CHEK2P3-201ENST00000416118 248 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 RPS26P4-201ENST00000431743 355 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 ZNF965P-201ENST00000432501 817 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC007000.2-201ENST00000442564 487 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC108729.2-201ENST00000476543 840 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC093663.2-201ENST00000484625 313 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 RPL7P41-201ENST00000485823 957 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 RN7SL591P-201ENST00000496150 292 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC140172.1-201ENST00000502928 141 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC027338.1-201ENST00000514840 825 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC068993.1-201ENST00000546724 589 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AL159169.2-201ENST00000610061 1269 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AL445493.3-201ENST00000619568 477 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC087385.3-201ENST00000620477 187 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC019080.5-201ENST00000624891 757 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC097372.4-201ENST00000625025 466 ntBASIC5.49□□□□□ -1.53
USP41Q3LFD5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP41Q3LFD5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP41Q3LFD5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP41Q3LFD5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
USP41Q3LFD5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP41Q3LFD5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 THAP12P5-201ENST00000405864 2275 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 AC133552.1-201ENST00000569988 4007 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 AP002530.1-201ENST00000405705 684 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 PTGES3P2-201ENST00000407942 482 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 AL133482.1-201ENST00000415988 498 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 MGAT2P2-201ENST00000427194 797 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 USP9YP9-201ENST00000429406 715 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 UBE2V1P6-201ENST00000430840 422 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 RHOT1P3-201ENST00000436571 331 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 AL138787.1-202ENST00000437804 898 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 RPL34P20-201ENST00000442771 351 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 AC245517.2-201ENST00000442890 346 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 AC092593.2-201ENST00000513866 913 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 AC079148.1-201ENST00000565944 819 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 OR8G7P-201ENST00000616658 848 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 AC106858.1-201ENST00000637497 429 ntBASIC5.48□□□□□ -1.53
USP41Q3LFD5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.48□□□□□ -1.53
USP41Q3LFD5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP41Q3LFD5 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms