Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.35□□□□□ -1.71
H3F3AP84243 AL513548.1-201ENST00000562904 1724 ntBASIC4.35□□□□□ -1.71
H3F3AP84243 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H3F3AP84243 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3AP84243 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H3F3AP84243 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
H3F3AP84243 IRF5P1-201ENST00000504852 2164 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
H3F3AP84243 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
H3F3AP84243 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
H3F3AP84243 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
H3F3AP84243 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
H3F3AP84243 RN7SKP149-201ENST00000363008 344 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 SNORA58B-201ENST00000364259 136 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
H3F3AP84243 COX6B1P1-201ENST00000415962 213 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.34□□□□□ -1.71
H3F3AP84243 AC007394.1-201ENST00000421941 531 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.34□□□□□ -1.71
H3F3AP84243 AL645608.4-201ENST00000423619 154 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 OR2AH1P-201ENST00000425717 928 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
H3F3AP84243 BRWD1P3-201ENST00000428816 390 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.34□□□□□ -1.71
H3F3AP84243 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 SUMO2P1-206ENST00000445436 284 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 OR52J1P-201ENST00000450596 932 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.34□□□□□ -1.71
H3F3AP84243 HIGD1AP8-201ENST00000453927 274 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 snoU13.20-201ENST00000459180 104 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 AC093270.2-201ENST00000486157 792 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 RPL32P9-201ENST00000487963 407 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
H3F3AP84243 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.34□□□□□ -1.71
H3F3AP84243 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.34□□□□□ -1.71
H3F3AP84243 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.34□□□□□ -1.71
H3F3AP84243 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.34□□□□□ -1.71
H3F3AP84243 BUD31P1-201ENST00000521828 359 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.34□□□□□ -1.71
H3F3AP84243 AC005000.1-201ENST00000536192 288 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 PCNPP1-201ENST00000552501 511 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.34□□□□□ -1.71
H3F3AP84243 AL049839.1-201ENST00000556151 657 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.34□□□□□ -1.71
H3F3AP84243 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 AC124856.1-201ENST00000600819 896 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 AC005084.1-201ENST00000605160 304 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 AC015914.2-201ENST00000618167 288 ntBASIC4.34□□□□□ -1.71
H3F3AP84243 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
H3F3AP84243 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
H3F3AP84243 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
H3F3AP84243 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
H3F3AP84243 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
H3F3AP84243 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.34□□□□□ -1.72
H3F3AP84243 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
H3F3AP84243 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.33□□□□□ -1.72
H3F3AP84243 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 MTND5P23-201ENST00000430812 1655 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3F3AP84243 BTBD10P1-201ENST00000549824 1352 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.33□□□□□ -1.72
H3F3AP84243 LINC00993-201ENST00000420453 540 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 PTP4A1P1-201ENST00000420539 515 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.33□□□□□ -1.72
H3F3AP84243 RBMY2TP-201ENST00000451162 947 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 RPL7P61-201ENST00000451721 751 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.33□□□□□ -1.72
H3F3AP84243 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.33□□□□□ -1.72
H3F3AP84243 OR9N1P-201ENST00000491296 333 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.33□□□□□ -1.72
H3F3AP84243 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.33□□□□□ -1.72
H3F3AP84243 HMGB3P16-201ENST00000508037 287 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 RNU6-709P-201ENST00000517257 104 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.33□□□□□ -1.72
H3F3AP84243 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.33□□□□□ -1.72
H3F3AP84243 AP001922.4-201ENST00000526967 290 ntBASIC4.33□□□□□ -1.72
H3F3AP84243 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.33□□□□□ -1.72
H3F3AP84243 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms