Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC111193.1-201ENST00000504097 155 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 ENPP7P11-201ENST00000505915 627 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.43□□□□□ -1.7
CX3CL1P78423 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.43□□□□□ -1.7
CX3CL1P78423 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.43□□□□□ -1.7
CX3CL1P78423 SEPT10P1-201ENST00000517342 1162 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.43□□□□□ -1.7
CX3CL1P78423 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.43□□□□□ -1.7
CX3CL1P78423 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 OR5AM1P-201ENST00000532136 1032 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AP002812.4-201ENST00000532139 286 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.43□□□□□ -1.7
CX3CL1P78423 LSM3P2-201ENST00000551246 273 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.43□□□□□ -1.7
CX3CL1P78423 AL049872.1-201ENST00000556323 322 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.43□□□□□ -1.7
CX3CL1P78423 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.43□□□□□ -1.7
CX3CL1P78423 AC008521.2-201ENST00000591021 259 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 ZNF92P3-201ENST00000596594 954 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AL606834.3-201ENST00000602615 496 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AP002906.1-201ENST00000603405 233 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 AC017076.1-201ENST00000607613 578 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AL355816.2-201ENST00000610049 647 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AC055764.2-201ENST00000610089 670 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 MIR7973-1-201ENST00000614683 76 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AC008115.3-201ENST00000614874 549 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AC022079.2-201ENST00000619739 566 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 AP001962.1-201ENST00000624114 559 ntBASIC4.43□□□□□ -1.7
CX3CL1P78423 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.43□□□□□ -1.7
CX3CL1P78423 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CX3CL1P78423 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CX3CL1P78423 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.43□□□□□ -1.7
CX3CL1P78423 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CX3CL1P78423 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.43□□□□□ -1.7
CX3CL1P78423 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CX3CL1P78423 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CL1P78423 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CX3CL1P78423 IGKV7-3-201ENST00000357453 298 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 RNU5E-10P-201ENST00000363506 118 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 U6.112-201ENST00000384129 70 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CX3CL1P78423 RPL23AP59-201ENST00000399415 461 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 SDHDP6-201ENST00000414693 480 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC079807.1-201ENST00000429993 481 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC004854.1-201ENST00000440356 349 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC064862.4-201ENST00000442180 334 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 LINC02210-201ENST00000444561 288 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 EEF1B2P6-201ENST00000445713 673 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 TRY2P-201ENST00000448860 689 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CL1P78423 snoU109.3-201ENST00000459477 145 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 PSAT1P4-201ENST00000466500 526 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC104164.3-201ENST00000467363 1258 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC023424.1-201ENST00000496058 459 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC112191.2-201ENST00000522428 333 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CL1P78423 MRPS21P7-201ENST00000566937 238 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC010547.6-201ENST00000571789 193 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 RN7SL339P-201ENST00000580597 296 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CL1P78423 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CL1P78423 AC023813.4-201ENST00000607580 580 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC093673.2-201ENST00000609674 331 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC010632.3-201ENST00000611377 369 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AL050303.3-201ENST00000613704 284 ntBASIC4.42□□□□□ -1.7
CX3CL1P78423 AC025574.2-201ENST00000615621 514 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms