Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 RNA5SP239-201ENST00000410218 129 ntBASIC4.33□□□□□ -1.72
VBP1P61758 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.33□□□□□ -1.72
VBP1P61758 Z84478.1-201ENST00000438230 1219 ntBASIC4.33□□□□□ -1.72
VBP1P61758 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.33□□□□□ -1.72
VBP1P61758 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.33□□□□□ -1.72
VBP1P61758 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VBP1P61758 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.33□□□□□ -1.72
VBP1P61758 AP006222.1-205ENST00000450734 457 ntBASIC4.33□□□□□ -1.72
VBP1P61758 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.33□□□□□ -1.72
VBP1P61758 AC025458.1-201ENST00000506046 166 ntBASIC4.33□□□□□ -1.72
VBP1P61758 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
VBP1P61758 AC018797.1-201ENST00000510791 255 ntBASIC4.33□□□□□ -1.72
VBP1P61758 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.33□□□□□ -1.72
VBP1P61758 AC116917.1-201ENST00000520558 305 ntBASIC4.33□□□□□ -1.72
VBP1P61758 BUD31P1-201ENST00000521828 359 ntBASIC4.33□□□□□ -1.72
VBP1P61758 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 MTND6P33-201ENST00000571794 183 ntBASIC4.33□□□□□ -1.72
VBP1P61758 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.33□□□□□ -1.72
VBP1P61758 AP001496.3-201ENST00000580230 913 ntBASIC4.33□□□□□ -1.72
VBP1P61758 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.33□□□□□ -1.72
VBP1P61758 AC015813.4-201ENST00000610469 179 ntBASIC4.33□□□□□ -1.72
VBP1P61758 AL049794.2-201ENST00000616301 365 ntBASIC4.33□□□□□ -1.72
VBP1P61758 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
VBP1P61758 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
VBP1P61758 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VBP1P61758 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VBP1P61758 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
VBP1P61758 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VBP1P61758 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.33□□□□□ -1.72
VBP1P61758 AC009229.4-201ENST00000623854 1947 ntBASIC4.33□□□□□ -1.72
VBP1P61758 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VBP1P61758 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.32□□□□□ -1.72
VBP1P61758 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VBP1P61758 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VBP1P61758 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.32□□□□□ -1.72
VBP1P61758 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.32□□□□□ -1.72
VBP1P61758 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.32□□□□□ -1.72
VBP1P61758 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
VBP1P61758 OR13C3-201ENST00000374781 1108 ntBASIC4.32□□□□□ -1.72
VBP1P61758 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.32□□□□□ -1.72
VBP1P61758 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VBP1P61758 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VBP1P61758 ATP5HP3-201ENST00000396994 486 ntBASIC4.32□□□□□ -1.72
VBP1P61758 MIR921-201ENST00000401133 56 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AL078604.1-201ENST00000404609 466 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AL136131.1-201ENST00000406079 803 ntBASIC4.32□□□□□ -1.72
VBP1P61758 MIR1182-201ENST00000408363 97 ntBASIC4.32□□□□□ -1.72
VBP1P61758 RNU6-603P-201ENST00000411403 107 ntBASIC4.32□□□□□ -1.72
VBP1P61758 Z74021.1-201ENST00000423610 407 ntBASIC4.32□□□□□ -1.72
VBP1P61758 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AC022022.1-201ENST00000430304 178 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 AC122718.2-201ENST00000505325 591 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AC109481.1-201ENST00000509173 282 ntBASIC4.32□□□□□ -1.72
VBP1P61758 IGLV3-26-201ENST00000520756 302 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.32□□□□□ -1.72
VBP1P61758 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.32□□□□□ -1.72
VBP1P61758 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.32□□□□□ -1.72
VBP1P61758 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.32□□□□□ -1.72
VBP1P61758 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.32□□□□□ -1.72
VBP1P61758 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.32□□□□□ -1.72
VBP1P61758 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 AL049872.1-201ENST00000556323 322 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.32□□□□□ -1.72
VBP1P61758 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.32□□□□□ -1.72
VBP1P61758 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 AC209154.1-201ENST00000582156 337 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.32□□□□□ -1.72
VBP1P61758 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VBP1P61758 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 AC087783.2-201ENST00000605070 562 ntBASIC4.32□□□□□ -1.72
VBP1P61758 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 AC116447.1-201ENST00000613153 453 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AL645927.2-201ENST00000618350 349 ntBASIC4.32□□□□□ -1.72
VBP1P61758 AC006453.5-201ENST00000636451 619 ntBASIC4.32□□□□□ -1.72
VBP1P61758 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VBP1P61758 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VBP1P61758 AC092079.1-201ENST00000558620 1985 ntBASIC4.32□□□□□ -1.72
VBP1P61758 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VBP1P61758 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.32□□□□□ -1.72
VBP1P61758 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.32□□□□□ -1.72
VBP1P61758 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.32□□□□□ -1.72
VBP1P61758 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VBP1P61758 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VBP1P61758 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.32□□□□□ -1.72
VBP1P61758 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms