Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.28□□□□□ -1.72
ACTBP60709 AC079395.2-201ENST00000610982 737 ntBASIC4.28□□□□□ -1.72
ACTBP60709 WBP1LP8-201ENST00000617401 327 ntBASIC4.28□□□□□ -1.72
ACTBP60709 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.28□□□□□ -1.72
ACTBP60709 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.28□□□□□ -1.72
ACTBP60709 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
ACTBP60709 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
ACTBP60709 AL049767.1-202ENST00000637826 242 ntBASIC4.28□□□□□ -1.72
ACTBP60709 MIR4302-201ENST00000638058 60 ntBASIC4.28□□□□□ -1.72
ACTBP60709 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ACTBP60709 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
ACTBP60709 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ACTBP60709 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
ACTBP60709 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ACTBP60709 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ACTBP60709 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
ACTBP60709 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ACTBP60709 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.27□□□□□ -1.73
ACTBP60709 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ACTBP60709 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ACTBP60709 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 AC011155.1-201ENST00000316512 456 ntBASIC4.27□□□□□ -1.73
ACTBP60709 RNA5SP132-201ENST00000364725 118 ntBASIC4.27□□□□□ -1.73
ACTBP60709 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 OR3A2-201ENST00000408891 1076 ntBASIC4.27□□□□□ -1.73
ACTBP60709 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.27□□□□□ -1.73
ACTBP60709 CEACAMP8-201ENST00000413902 580 ntBASIC4.27□□□□□ -1.73
ACTBP60709 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.27□□□□□ -1.73
ACTBP60709 VN1R31P-201ENST00000417498 730 ntBASIC4.27□□□□□ -1.73
ACTBP60709 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 FAM96AP1-201ENST00000430879 482 ntBASIC4.27□□□□□ -1.73
ACTBP60709 RPS27P18-201ENST00000431701 247 ntBASIC4.27□□□□□ -1.73
ACTBP60709 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.27□□□□□ -1.73
ACTBP60709 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.27□□□□□ -1.73
ACTBP60709 AL391987.1-201ENST00000441025 200 ntBASIC4.27□□□□□ -1.73
ACTBP60709 Z80107.2-201ENST00000445127 392 ntBASIC4.27□□□□□ -1.73
ACTBP60709 AC073587.1-201ENST00000447093 876 ntBASIC4.27□□□□□ -1.73
ACTBP60709 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 AL133445.1-201ENST00000467051 452 ntBASIC4.27□□□□□ -1.73
ACTBP60709 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.27□□□□□ -1.73
ACTBP60709 RN7SL558P-201ENST00000497468 299 ntBASIC4.27□□□□□ -1.73
ACTBP60709 RPEP1-201ENST00000504507 658 ntBASIC4.27□□□□□ -1.73
ACTBP60709 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.27□□□□□ -1.73
ACTBP60709 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.27□□□□□ -1.73
ACTBP60709 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.27□□□□□ -1.73
ACTBP60709 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.27□□□□□ -1.73
ACTBP60709 AC087783.2-201ENST00000605070 562 ntBASIC4.27□□□□□ -1.73
ACTBP60709 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.27□□□□□ -1.73
ACTBP60709 AL356489.2-201ENST00000566968 3528 ntBASIC4.27□□□□□ -1.73
ACTBP60709 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ACTBP60709 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ACTBP60709 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
ACTBP60709 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.26□□□□□ -1.73
ACTBP60709 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
ACTBP60709 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACTBP60709 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
ACTBP60709 AC008549.2-201ENST00000333482 706 ntBASIC4.26□□□□□ -1.73
ACTBP60709 IL6STP1-201ENST00000346911 1020 ntBASIC4.26□□□□□ -1.73
ACTBP60709 U3.3-201ENST00000362986 216 ntBASIC4.26□□□□□ -1.73
ACTBP60709 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ACTBP60709 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ACTBP60709 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACTBP60709 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ACTBP60709 RNU1-149P-201ENST00000390870 161 ntBASIC4.26□□□□□ -1.73
ACTBP60709 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ACTBP60709 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
ACTBP60709 LRRC37BP1-201ENST00000398851 714 ntBASIC4.26□□□□□ -1.73
ACTBP60709 OR4K12P-201ENST00000406538 961 ntBASIC4.26□□□□□ -1.73
ACTBP60709 RN7SKP59-201ENST00000410520 314 ntBASIC4.26□□□□□ -1.73
ACTBP60709 AL390774.1-201ENST00000411924 246 ntBASIC4.26□□□□□ -1.73
ACTBP60709 RPL21P108-201ENST00000413857 481 ntBASIC4.26□□□□□ -1.73
ACTBP60709 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.26□□□□□ -1.73
ACTBP60709 QRSL1P2-201ENST00000418582 964 ntBASIC4.26□□□□□ -1.73
ACTBP60709 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.26□□□□□ -1.73
ACTBP60709 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.26□□□□□ -1.73
ACTBP60709 SPRYD7P1-201ENST00000443861 570 ntBASIC4.26□□□□□ -1.73
ACTBP60709 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.26□□□□□ -1.73
ACTBP60709 UBE2V2P4-201ENST00000447495 259 ntBASIC4.26□□□□□ -1.73
ACTBP60709 AL691482.1-201ENST00000453255 87 ntBASIC4.26□□□□□ -1.73
ACTBP60709 AL354710.1-201ENST00000453641 246 ntBASIC4.26□□□□□ -1.73
ACTBP60709 SIAH1P1-201ENST00000479411 923 ntBASIC4.26□□□□□ -1.73
ACTBP60709 TRBV8-1-201ENST00000481590 279 ntBASIC4.26□□□□□ -1.73
ACTBP60709 AC083829.1-201ENST00000503756 657 ntBASIC4.26□□□□□ -1.73
ACTBP60709 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.26□□□□□ -1.73
ACTBP60709 BX510359.5-201ENST00000515651 304 ntBASIC4.26□□□□□ -1.73
ACTBP60709 Y_RNA.719-201ENST00000517156 106 ntBASIC4.26□□□□□ -1.73
ACTBP60709 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.26□□□□□ -1.73
ACTBP60709 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.26□□□□□ -1.73
ACTBP60709 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACTBP60709 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ACTBP60709 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.26□□□□□ -1.73
ACTBP60709 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.26□□□□□ -1.73
ACTBP60709 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.26□□□□□ -1.73
ACTBP60709 AC011445.2-201ENST00000599274 173 ntBASIC4.26□□□□□ -1.73
ACTBP60709 IMMP1LP1-201ENST00000605170 488 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms