Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN20P56880 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN20P56880 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN20P56880 SAMMSON-209ENST00000641222 1100 ntBASIC4.89□□□□□ -1.63
CLDN20P56880 CASC19-264ENST00000641912 1184 ntBASIC4.89□□□□□ -1.63
CLDN20P56880 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN20P56880 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN20P56880 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN20P56880 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CLDN20P56880 AL731566.1-201ENST00000620490 1937 ntBASIC4.89□□□□□ -1.63
CLDN20P56880 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN20P56880 AC003973.3-201ENST00000624863 2822 ntBASIC4.89□□□□□ -1.63
CLDN20P56880 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLDN20P56880 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN20P56880 AL078621.3-201ENST00000623707 2042 ntBASIC4.89□□□□□ -1.63
CLDN20P56880 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN20P56880 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN20P56880 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CLDN20P56880 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 AC114947.2-201ENST00000565748 2125 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN20P56880 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
CLDN20P56880 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN20P56880 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN20P56880 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN20P56880 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN20P56880 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN20P56880 RNU6-354P-201ENST00000383862 107 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 RNU6-610P-201ENST00000384264 107 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 SNORD56.6-201ENST00000384569 71 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 MIR122-201ENST00000385044 85 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 OR4K12P-201ENST00000406538 961 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 RN7SKP97-201ENST00000410966 333 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN20P56880 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN20P56880 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 HSPD1P12-201ENST00000429127 1069 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 MTCO1P43-201ENST00000431831 488 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 AC011242.1-201ENST00000433596 1158 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 AC074386.1-201ENST00000476560 767 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN20P56880 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.88□□□□□ -1.63
CLDN20P56880 HMGB1P44-201ENST00000508597 572 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN20P56880 AP004607.2-201ENST00000533949 322 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN20P56880 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN20P56880 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN20P56880 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN20P56880 AC009237.13-201ENST00000603193 276 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 AC025175.1-201ENST00000606482 759 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.88□□□□□ -1.63
CLDN20P56880 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN20P56880 AC078880.5-201ENST00000617845 421 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 AC091046.2-201ENST00000620775 665 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 MIR6837-201ENST00000620884 64 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 AC073869.8-201ENST00000641806 335 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN20P56880 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CLDN20P56880 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN20P56880 RARSP1-201ENST00000542842 1418 ntBASIC4.88□□□□□ -1.63
CLDN20P56880 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN20P56880 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN20P56880 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CLDN20P56880 AC007342.5-201ENST00000571340 2142 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 RNA5SP339-201ENST00000390987 122 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AC005522.1-201ENST00000395416 346 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 ATP5HP3-201ENST00000396994 486 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 RPL21P67-201ENST00000402896 478 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN20P56880 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN20P56880 RPL23AP4-201ENST00000427757 463 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 RPL7AP49-201ENST00000429522 581 ntBASIC4.87□□□□□ -1.63
CLDN20P56880 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms