Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU4-40P-201ENST00000364351 143 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 RNU6-619P-201ENST00000365146 108 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SUMO3P55854 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.34□□□□□ -1.55
SUMO3P55854 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SUMO3P55854 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.34□□□□□ -1.55
SUMO3P55854 AC007435.1-201ENST00000421086 415 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.34□□□□□ -1.55
SUMO3P55854 MTCO1P54-201ENST00000430139 712 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.34□□□□□ -1.55
SUMO3P55854 RPS12P17-201ENST00000438591 377 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AL008629.1-201ENST00000438615 184 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 H3F3BP1-201ENST00000440551 403 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 TXNP5-201ENST00000441043 315 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AC023141.8-201ENST00000442554 208 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.34□□□□□ -1.55
SUMO3P55854 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.34□□□□□ -1.55
SUMO3P55854 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 RPL37P3-201ENST00000456825 293 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 RN7SL57P-201ENST00000493687 290 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 PFN1P8-201ENST00000497012 543 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AC093755.1-201ENST00000512950 1023 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.34□□□□□ -1.55
SUMO3P55854 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.34□□□□□ -1.55
SUMO3P55854 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.34□□□□□ -1.55
SUMO3P55854 AP000648.1-201ENST00000529682 397 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 OR4C2P-201ENST00000530855 1064 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AC007834.2-201ENST00000536310 343 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SUMO3P55854 AC091078.2-201ENST00000557145 559 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 MIR4260-201ENST00000583107 67 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.34□□□□□ -1.55
SUMO3P55854 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.34□□□□□ -1.55
SUMO3P55854 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.34□□□□□ -1.55
SUMO3P55854 AC069545.1-201ENST00000605671 358 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AL031601.1-201ENST00000605702 394 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AP003392.5-201ENST00000607857 415 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AP004247.3-201ENST00000608682 624 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.34□□□□□ -1.55
SUMO3P55854 AC022509.4-201ENST00000621404 572 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 AP001153.1-201ENST00000641024 338 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 MIR193BHG-214ENST00000641765 509 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.34□□□□□ -1.55
SUMO3P55854 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SUMO3P55854 BX005019.1-201ENST00000561881 1810 ntBASIC5.34□□□□□ -1.55
SUMO3P55854 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.34□□□□□ -1.56
SUMO3P55854 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.34□□□□□ -1.56
SUMO3P55854 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
SUMO3P55854 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.34□□□□□ -1.56
SUMO3P55854 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 AL161756.3-201ENST00000641216 2071 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 HMGB1P5-201ENST00000255320 642 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 RNA5SP477-201ENST00000362639 119 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 SFR1P1-201ENST00000403720 688 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.33□□□□□ -1.56
SUMO3P55854 AK4P4-201ENST00000419465 646 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.33□□□□□ -1.56
SUMO3P55854 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 AL035660.1-201ENST00000422041 222 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 RPL21P43-201ENST00000425440 472 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.33□□□□□ -1.56
SUMO3P55854 VN1R21P-201ENST00000426703 765 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 PPIAP13-201ENST00000434706 478 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.33□□□□□ -1.56
SUMO3P55854 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.33□□□□□ -1.56
SUMO3P55854 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 USP9YP22-201ENST00000438971 294 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 FGF7P5-201ENST00000441829 291 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.33□□□□□ -1.56
SUMO3P55854 NPM1P39-201ENST00000449818 867 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.33□□□□□ -1.56
SUMO3P55854 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 AC026348.1-201ENST00000462549 1053 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC117394.1-201ENST00000477323 567 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms