Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LIM2P55344 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.61□□□□□ -1.67
LIM2P55344 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LIM2P55344 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.6□□□□□ -1.67
LIM2P55344 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 AC007342.5-201ENST00000571340 2142 ntBASIC4.6□□□□□ -1.67
LIM2P55344 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 MIR1271-201ENST00000408537 86 ntBASIC4.6□□□□□ -1.67
LIM2P55344 RPS20P25-201ENST00000412447 352 ntBASIC4.6□□□□□ -1.67
LIM2P55344 COX6B1P1-201ENST00000415962 213 ntBASIC4.6□□□□□ -1.67
LIM2P55344 PTP4A1P1-201ENST00000420539 515 ntBASIC4.6□□□□□ -1.67
LIM2P55344 AC007394.1-201ENST00000421941 531 ntBASIC4.6□□□□□ -1.67
LIM2P55344 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.6□□□□□ -1.67
LIM2P55344 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.6□□□□□ -1.67
LIM2P55344 Z85994.2-201ENST00000434327 452 ntBASIC4.6□□□□□ -1.67
LIM2P55344 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.6□□□□□ -1.67
LIM2P55344 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.6□□□□□ -1.67
LIM2P55344 RPL7P61-201ENST00000451721 751 ntBASIC4.6□□□□□ -1.67
LIM2P55344 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.6□□□□□ -1.67
LIM2P55344 RPL31P53-201ENST00000457065 348 ntBASIC4.6□□□□□ -1.67
LIM2P55344 AL591473.1-201ENST00000464297 313 ntBASIC4.6□□□□□ -1.67
LIM2P55344 RPL7P16-201ENST00000479738 738 ntBASIC4.6□□□□□ -1.67
LIM2P55344 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 AC138938.1-201ENST00000515431 782 ntBASIC4.6□□□□□ -1.67
LIM2P55344 OR1F2P-201ENST00000570470 933 ntBASIC4.6□□□□□ -1.67
LIM2P55344 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.6□□□□□ -1.67
LIM2P55344 SNORA74C-1-201ENST00000580726 201 ntBASIC4.6□□□□□ -1.67
LIM2P55344 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.6□□□□□ -1.67
LIM2P55344 AC125494.2-201ENST00000602431 657 ntBASIC4.6□□□□□ -1.67
LIM2P55344 AC011453.2-201ENST00000603737 729 ntBASIC4.6□□□□□ -1.67
LIM2P55344 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 OR8G7P-201ENST00000616658 848 ntBASIC4.6□□□□□ -1.67
LIM2P55344 AC022106.2-201ENST00000620114 757 ntBASIC4.6□□□□□ -1.67
LIM2P55344 AC087385.3-201ENST00000620477 187 ntBASIC4.6□□□□□ -1.67
LIM2P55344 CR381572.2-201ENST00000624852 397 ntBASIC4.6□□□□□ -1.67
LIM2P55344 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.6□□□□□ -1.67
LIM2P55344 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.6□□□□□ -1.67
LIM2P55344 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.6□□□□□ -1.67
LIM2P55344 SMG1P4-204ENST00000523028 4131 ntBASIC4.6□□□□□ -1.67
LIM2P55344 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIM2P55344 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
LIM2P55344 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LIM2P55344 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 AL022322.2-201ENST00000624072 20397 ntBASIC4.59□□□□□ -1.67
LIM2P55344 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LIM2P55344 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 AL359643.1-201ENST00000404109 423 ntBASIC4.59□□□□□ -1.67
LIM2P55344 CKS1BP6-201ENST00000424932 240 ntBASIC4.59□□□□□ -1.67
LIM2P55344 BRWD1P3-201ENST00000428816 390 ntBASIC4.59□□□□□ -1.67
LIM2P55344 RPL12P3-201ENST00000440080 396 ntBASIC4.59□□□□□ -1.67
LIM2P55344 ZNF652P1-201ENST00000442420 1309 ntBASIC4.59□□□□□ -1.67
LIM2P55344 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 RHEBP2-201ENST00000450289 600 ntBASIC4.59□□□□□ -1.67
LIM2P55344 OR52J1P-201ENST00000450596 932 ntBASIC4.59□□□□□ -1.67
LIM2P55344 AC234781.3-201ENST00000452540 973 ntBASIC4.59□□□□□ -1.67
LIM2P55344 HIGD1AP8-201ENST00000453927 274 ntBASIC4.59□□□□□ -1.67
LIM2P55344 AC239798.3-201ENST00000454459 408 ntBASIC4.59□□□□□ -1.67
LIM2P55344 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.59□□□□□ -1.67
LIM2P55344 AC022336.1-201ENST00000475510 337 ntBASIC4.59□□□□□ -1.67
LIM2P55344 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
LIM2P55344 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.59□□□□□ -1.67
LIM2P55344 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.59□□□□□ -1.67
LIM2P55344 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.59□□□□□ -1.67
LIM2P55344 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.59□□□□□ -1.67
LIM2P55344 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.59□□□□□ -1.67
LIM2P55344 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 AC068993.1-201ENST00000546724 589 ntBASIC4.59□□□□□ -1.67
LIM2P55344 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LIM2P55344 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.59□□□□□ -1.67
LIM2P55344 EDDM3DP-201ENST00000554692 434 ntBASIC4.59□□□□□ -1.67
LIM2P55344 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.59□□□□□ -1.67
LIM2P55344 AC107021.2-201ENST00000567714 2095 ntBASIC4.59□□□□□ -1.67
LIM2P55344 AC007497.1-201ENST00000610421 561 ntBASIC4.59□□□□□ -1.67
LIM2P55344 MIR8069-1-201ENST00000616627 86 ntBASIC4.59□□□□□ -1.67
LIM2P55344 MIR8069-2-201ENST00000621412 86 ntBASIC4.59□□□□□ -1.67
LIM2P55344 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.59□□□□□ -1.67
LIM2P55344 SAMMSON-226ENST00000642089 1582 ntBASIC4.59□□□□□ -1.67
LIM2P55344 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIM2P55344 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
LIM2P55344 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LIM2P55344 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LIM2P55344 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LIM2P55344 TCP1P3-201ENST00000414406 1498 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms