Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC019080.5-201ENST00000624891 757 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.29□□□□□ -1.4
EPHB3P54753 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 MTCO1P11-201ENST00000429111 1528 ntBASIC6.29□□□□□ -1.4
EPHB3P54753 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.29□□□□□ -1.4
EPHB3P54753 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
EPHB3P54753 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHB3P54753 PARP4P2-201ENST00000446672 3326 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC078880.4-201ENST00000617627 1749 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.28□□□□□ -1.4
EPHB3P54753 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 AL356317.1-201ENST00000396110 1436 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 Y_RNA.11-201ENST00000362375 109 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 RNU6-413P-201ENST00000384115 107 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 MT-TH-201ENST00000387441 69 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 RNU6-932P-201ENST00000391108 106 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 MCTS2P-201ENST00000394552 546 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 AL589994.1-201ENST00000404962 340 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 Z75741.2-201ENST00000417272 1167 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.28□□□□□ -1.4
EPHB3P54753 AL354941.1-201ENST00000438600 464 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 USP9YP22-201ENST00000438971 294 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.28□□□□□ -1.4
EPHB3P54753 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 AURKAPS1-201ENST00000451805 1212 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 ZNF114P1-201ENST00000453500 292 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 RN7SL717P-201ENST00000478343 297 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 RPS6P4-201ENST00000494693 758 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 AC023818.1-201ENST00000498379 384 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC093281.2-201ENST00000510153 597 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 AC026782.2-201ENST00000510845 636 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 AC109471.1-201ENST00000511631 612 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 HIGD1AP18-201ENST00000520730 278 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 TPM3P3-201ENST00000521343 354 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.28□□□□□ -1.4
EPHB3P54753 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.28□□□□□ -1.4
EPHB3P54753 OR4H6P-201ENST00000563771 921 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 AC007038.2-201ENST00000608095 740 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 AC004067.1-201ENST00000608733 700 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.28□□□□□ -1.4
EPHB3P54753 RN7SL787P-201ENST00000613000 284 ntBASIC6.28□□□□□ -1.4
EPHB3P54753 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
EPHB3P54753 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.28□□□□□ -1.4
EPHB3P54753 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.28□□□□□ -1.4
EPHB3P54753 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
EPHB3P54753 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.28□□□□□ -1.4
EPHB3P54753 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
EPHB3P54753 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
EPHB3P54753 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
EPHB3P54753 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC020656.2-201ENST00000613291 5309 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC090220.1-201ENST00000593078 1699 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 AL137141.1-201ENST00000624622 4836 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 FAM3C2-201ENST00000312214 681 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 SNORD8-201ENST00000363915 110 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 Y_RNA.303-201ENST00000364998 94 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 Y_RNA.560-201ENST00000384689 102 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms