Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 AC239798.3-201ENST00000454459 408 ntBASIC5□□□□□ -1.61
PDX1P52945 EIF4A2P2-201ENST00000455776 1070 ntBASIC5□□□□□ -1.61
PDX1P52945 AC079168.1-201ENST00000458741 345 ntBASIC5□□□□□ -1.61
PDX1P52945 AC108729.2-201ENST00000476543 840 ntBASIC5□□□□□ -1.61
PDX1P52945 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 LARP7P4-201ENST00000481075 878 ntBASIC5□□□□□ -1.61
PDX1P52945 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5□□□□□ -1.61
PDX1P52945 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 AC093770.1-201ENST00000511559 571 ntBASIC5□□□□□ -1.61
PDX1P52945 AC016550.3-201ENST00000515706 767 ntBASIC5□□□□□ -1.61
PDX1P52945 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 AC092709.1-201ENST00000521355 1045 ntBASIC5□□□□□ -1.61
PDX1P52945 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5□□□□□ -1.61
PDX1P52945 AC021006.3-201ENST00000530771 192 ntBASIC5□□□□□ -1.61
PDX1P52945 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 AC027176.2-201ENST00000559166 746 ntBASIC5□□□□□ -1.61
PDX1P52945 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
PDX1P52945 AC009117.1-201ENST00000563948 554 ntBASIC5□□□□□ -1.61
PDX1P52945 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDX1P52945 AC016839.1-201ENST00000578162 867 ntBASIC5□□□□□ -1.61
PDX1P52945 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 AC008814.1-201ENST00000603797 406 ntBASIC5□□□□□ -1.61
PDX1P52945 AC087283.1-201ENST00000604029 1074 ntBASIC5□□□□□ -1.61
PDX1P52945 AL133370.2-201ENST00000619934 439 ntBASIC5□□□□□ -1.61
PDX1P52945 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5□□□□□ -1.61
PDX1P52945 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5□□□□□ -1.61
PDX1P52945 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 OR5AC4P-202ENST00000642086 985 ntBASIC5□□□□□ -1.61
PDX1P52945 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5□□□□□ -1.61
PDX1P52945 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5□□□□□ -1.61
PDX1P52945 AC132825.1-201ENST00000463573 2247 ntBASIC5□□□□□ -1.61
PDX1P52945 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 HSPA8P14-201ENST00000552265 1805 ntBASIC5□□□□□ -1.61
PDX1P52945 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PDX1P52945 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5□□□□□ -1.61
PDX1P52945 AC015813.6-201ENST00000624409 5808 ntBASIC4.99□□□□□ -1.61
PDX1P52945 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
PDX1P52945 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 AC116158.1-201ENST00000560231 2129 ntBASIC4.99□□□□□ -1.61
PDX1P52945 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 AC010132.2-201ENST00000295493 1043 ntBASIC4.99□□□□□ -1.61
PDX1P52945 RN7SKP149-201ENST00000363008 344 ntBASIC4.99□□□□□ -1.61
PDX1P52945 SNORD65-201ENST00000391079 73 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AC013442.1-201ENST00000397347 228 ntBASIC4.99□□□□□ -1.61
PDX1P52945 FABP12P1-201ENST00000401911 322 ntBASIC4.99□□□□□ -1.61
PDX1P52945 RANP4-201ENST00000413361 655 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AL590139.1-201ENST00000416267 400 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.99□□□□□ -1.61
PDX1P52945 RPS26P4-201ENST00000431743 355 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.99□□□□□ -1.61
PDX1P52945 AC008072.1-201ENST00000434254 824 ntBASIC4.99□□□□□ -1.61
PDX1P52945 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.99□□□□□ -1.61
PDX1P52945 AL138787.1-202ENST00000437804 898 ntBASIC4.99□□□□□ -1.61
PDX1P52945 KNOP1P3-201ENST00000446933 426 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AC090804.1-201ENST00000448870 490 ntBASIC4.99□□□□□ -1.61
PDX1P52945 RN7SL738P-201ENST00000470264 297 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.99□□□□□ -1.61
PDX1P52945 AC006463.2-201ENST00000473326 348 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AC012123.2-201ENST00000485809 248 ntBASIC4.99□□□□□ -1.61
PDX1P52945 HMGN2P25-201ENST00000486956 268 ntBASIC4.99□□□□□ -1.61
PDX1P52945 OR7H2P-201ENST00000513483 306 ntBASIC4.99□□□□□ -1.61
PDX1P52945 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 RN7SKP34-201ENST00000516142 244 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AC012400.1-201ENST00000518452 381 ntBASIC4.99□□□□□ -1.61
PDX1P52945 HMGB1P46-201ENST00000520062 610 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.99□□□□□ -1.61
PDX1P52945 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDX1P52945 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.99□□□□□ -1.61
PDX1P52945 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.99□□□□□ -1.61
PDX1P52945 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.99□□□□□ -1.61
PDX1P52945 AC027216.1-201ENST00000577726 685 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.99□□□□□ -1.61
PDX1P52945 FAM106CP-201ENST00000582212 507 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.99□□□□□ -1.61
PDX1P52945 AC005776.1-201ENST00000603164 290 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AC009027.1-201ENST00000604510 479 ntBASIC4.99□□□□□ -1.61
PDX1P52945 MEMO1P5-201ENST00000604810 406 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AL022394.1-201ENST00000606979 292 ntBASIC4.99□□□□□ -1.61
PDX1P52945 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 MIR378J-201ENST00000611988 109 ntBASIC4.99□□□□□ -1.61
PDX1P52945 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.99□□□□□ -1.61
PDX1P52945 MIR7703-201ENST00000620784 77 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AL138960.2-201ENST00000625145 535 ntBASIC4.99□□□□□ -1.61
PDX1P52945 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.99□□□□□ -1.61
PDX1P52945 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms