Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AC015795.1-201ENST00000513669 327 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
GTF2A1P52655 VN1R79P-201ENST00000593540 513 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 PPATP2-201ENST00000605635 508 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.69□□□□□ -1.66
GTF2A1P52655 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.69□□□□□ -1.66
GTF2A1P52655 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
GTF2A1P52655 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF2A1P52655 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
GTF2A1P52655 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF2A1P52655 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AC093909.5-201ENST00000621839 1799 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GTF2A1P52655 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GTF2A1P52655 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF2A1P52655 MIR423-201ENST00000362201 94 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 RN7SKP184-201ENST00000362348 333 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 RNA5SP322-201ENST00000363617 119 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 NCSTNP1-201ENST00000406229 144 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 RN7SKP56-201ENST00000410513 331 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 TRIM60P17-201ENST00000415181 719 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AC092647.1-201ENST00000420654 287 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AL133173.1-201ENST00000423458 397 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 DPY19L1P2-201ENST00000426647 915 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 GAPDHP34-201ENST00000432112 823 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF2A1P52655 BMS1P19-201ENST00000433925 393 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AC093166.3-201ENST00000448785 303 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 HMGB3P22-202ENST00000451823 572 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AL445665.1-202ENST00000452436 324 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AC068305.1-201ENST00000497406 726 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF2A1P52655 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF2A1P52655 SNORA43.3-201ENST00000517240 103 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF2A1P52655 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AL109741.3-201ENST00000561748 592 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AC002310.3-201ENST00000569728 723 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.68□□□□□ -1.66
GTF2A1P52655 AC012616.1-201ENST00000600294 197 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AC005520.3-201ENST00000602874 370 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AC090181.2-201ENST00000602975 672 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AL353726.1-201ENST00000614041 1000 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AL118522.2-201ENST00000616045 615 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 AL357153.4-201ENST00000620487 1016 ntBASIC4.68□□□□□ -1.66
GTF2A1P52655 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
GTF2A1P52655 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
GTF2A1P52655 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
GTF2A1P52655 AC090181.3-201ENST00000624777 1514 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.67□□□□□ -1.66
GTF2A1P52655 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
GTF2A1P52655 AC007342.7-201ENST00000624610 2337 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GTF2A1P52655 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.67□□□□□ -1.66
GTF2A1P52655 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
GTF2A1P52655 RNU1-89P-201ENST00000384592 164 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 GLULP6-201ENST00000399502 913 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 AL080315.1-201ENST00000406055 466 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.67□□□□□ -1.66
GTF2A1P52655 QRSL1P2-201ENST00000418582 964 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.67□□□□□ -1.66
GTF2A1P52655 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.67□□□□□ -1.66
GTF2A1P52655 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.67□□□□□ -1.66
GTF2A1P52655 RPL10P17-201ENST00000453852 316 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 AC090013.1-201ENST00000485147 480 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.67□□□□□ -1.66
GTF2A1P52655 PARP4P3-201ENST00000510265 317 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.67□□□□□ -1.66
GTF2A1P52655 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.67□□□□□ -1.66
GTF2A1P52655 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.67□□□□□ -1.66
GTF2A1P52655 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.67□□□□□ -1.66
GTF2A1P52655 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.67□□□□□ -1.66
GTF2A1P52655 IGBP1P1-201ENST00000554337 1009 ntBASIC4.67□□□□□ -1.66
GTF2A1P52655 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.67□□□□□ -1.66
GTF2A1P52655 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.67□□□□□ -1.66
GTF2A1P52655 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.67□□□□□ -1.66
GTF2A1P52655 CCDC58P1-201ENST00000578567 430 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms