Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OR10D4P-201ENST00000525892 951 ntBASIC5.27□□□□□ -1.57
LHX1P48742 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
LHX1P48742 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.27□□□□□ -1.57
LHX1P48742 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.27□□□□□ -1.57
LHX1P48742 AC087783.2-201ENST00000605070 562 ntBASIC5.27□□□□□ -1.57
LHX1P48742 FAM25E-202ENST00000608562 189 ntBASIC5.27□□□□□ -1.57
LHX1P48742 AC116651.1-201ENST00000609724 556 ntBASIC5.27□□□□□ -1.57
LHX1P48742 AC074276.2-201ENST00000619891 348 ntBASIC5.27□□□□□ -1.57
LHX1P48742 AL133370.2-201ENST00000619934 439 ntBASIC5.27□□□□□ -1.57
LHX1P48742 CR381572.2-201ENST00000624852 397 ntBASIC5.27□□□□□ -1.57
LHX1P48742 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LHX1P48742 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.27□□□□□ -1.57
LHX1P48742 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
LHX1P48742 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LHX1P48742 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 SNORA73.1-201ENST00000363107 205 ntBASIC5.26□□□□□ -1.57
LHX1P48742 RNU6-1251P-201ENST00000364502 107 ntBASIC5.26□□□□□ -1.57
LHX1P48742 MIR421-201ENST00000365696 85 ntBASIC5.26□□□□□ -1.57
LHX1P48742 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 AL035419.1-201ENST00000397037 564 ntBASIC5.26□□□□□ -1.57
LHX1P48742 AC234781.4-201ENST00000419384 244 ntBASIC5.26□□□□□ -1.57
LHX1P48742 PTP4A1P1-201ENST00000420539 515 ntBASIC5.26□□□□□ -1.57
LHX1P48742 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.26□□□□□ -1.57
LHX1P48742 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.26□□□□□ -1.57
LHX1P48742 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 AC116562.1-201ENST00000485355 781 ntBASIC5.26□□□□□ -1.57
LHX1P48742 AC083982.1-201ENST00000485679 344 ntBASIC5.26□□□□□ -1.57
LHX1P48742 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.26□□□□□ -1.57
LHX1P48742 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.26□□□□□ -1.57
LHX1P48742 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.26□□□□□ -1.57
LHX1P48742 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.26□□□□□ -1.57
LHX1P48742 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.26□□□□□ -1.57
LHX1P48742 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LHX1P48742 AC116553.2-201ENST00000564203 463 ntBASIC5.26□□□□□ -1.57
LHX1P48742 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.26□□□□□ -1.57
LHX1P48742 MIR4480-201ENST00000582492 71 ntBASIC5.26□□□□□ -1.57
LHX1P48742 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 AC020910.3-201ENST00000603701 874 ntBASIC5.26□□□□□ -1.57
LHX1P48742 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LHX1P48742 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.26□□□□□ -1.57
LHX1P48742 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.26□□□□□ -1.57
LHX1P48742 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 AC063976.2-201ENST00000425667 3556 ntBASIC5.26□□□□□ -1.57
LHX1P48742 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.26□□□□□ -1.57
LHX1P48742 Z95331.1-201ENST00000623075 23112 ntBASIC5.26□□□□□ -1.57
LHX1P48742 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LHX1P48742 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.25□□□□□ -1.57
LHX1P48742 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.25□□□□□ -1.57
LHX1P48742 SDAD1P1-202ENST00000524156 2051 ntBASIC5.25□□□□□ -1.57
LHX1P48742 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LHX1P48742 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 CDC27P2-201ENST00000425026 1922 ntBASIC5.25□□□□□ -1.57
LHX1P48742 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
LHX1P48742 AP005432.1-201ENST00000580891 3485 ntBASIC5.25□□□□□ -1.57
LHX1P48742 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LHX1P48742 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
LHX1P48742 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.25□□□□□ -1.57
LHX1P48742 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.25□□□□□ -1.57
LHX1P48742 ZFAND6P1-201ENST00000434138 605 ntBASIC5.25□□□□□ -1.57
LHX1P48742 AC093414.1-201ENST00000434712 514 ntBASIC5.25□□□□□ -1.57
LHX1P48742 RPL12P18-201ENST00000437175 325 ntBASIC5.25□□□□□ -1.57
LHX1P48742 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.25□□□□□ -1.57
LHX1P48742 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.25□□□□□ -1.57
LHX1P48742 AL157884.3-201ENST00000448273 1184 ntBASIC5.25□□□□□ -1.57
LHX1P48742 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.25□□□□□ -1.57
LHX1P48742 AC091685.2-201ENST00000454924 864 ntBASIC5.25□□□□□ -1.57
LHX1P48742 RPS23P1-201ENST00000491662 432 ntBASIC5.25□□□□□ -1.57
LHX1P48742 RN7SL591P-201ENST00000496150 292 ntBASIC5.25□□□□□ -1.57
LHX1P48742 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.25□□□□□ -1.57
LHX1P48742 MYL12BP2-201ENST00000503948 512 ntBASIC5.25□□□□□ -1.57
LHX1P48742 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.25□□□□□ -1.57
LHX1P48742 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.25□□□□□ -1.57
LHX1P48742 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.25□□□□□ -1.57
LHX1P48742 AP006245.2-201ENST00000522004 300 ntBASIC5.25□□□□□ -1.57
LHX1P48742 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
LHX1P48742 MIR4737-201ENST00000583979 81 ntBASIC5.25□□□□□ -1.57
LHX1P48742 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.25□□□□□ -1.57
LHX1P48742 AL031320.1-201ENST00000604177 357 ntBASIC5.25□□□□□ -1.57
LHX1P48742 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.25□□□□□ -1.57
LHX1P48742 AC091953.3-201ENST00000623220 236 ntBASIC5.25□□□□□ -1.57
LHX1P48742 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms