Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MMP13P45452 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP13P45452 RNU1-77P-201ENST00000390868 162 ntBASIC5.49□□□□□ -1.53
MMP13P45452 U3.25-201ENST00000391209 220 ntBASIC5.49□□□□□ -1.53
MMP13P45452 RN7SKP206-201ENST00000410823 293 ntBASIC5.49□□□□□ -1.53
MMP13P45452 OR51B3P-201ENST00000412287 913 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP13P45452 AC104333.2-201ENST00000422630 192 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AC013262.1-201ENST00000426710 252 ntBASIC5.49□□□□□ -1.53
MMP13P45452 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP13P45452 RAB9AP5-201ENST00000437794 597 ntBASIC5.49□□□□□ -1.53
MMP13P45452 RAB9AP2-201ENST00000443911 597 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AL591719.1-201ENST00000444669 744 ntBASIC5.49□□□□□ -1.53
MMP13P45452 EXOSC3P1-201ENST00000448649 500 ntBASIC5.49□□□□□ -1.53
MMP13P45452 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP13P45452 RPL7P45-201ENST00000455851 743 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP13P45452 TPT1P1-201ENST00000458495 518 ntBASIC5.49□□□□□ -1.53
MMP13P45452 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP13P45452 AP000563.1-201ENST00000490865 758 ntBASIC5.49□□□□□ -1.53
MMP13P45452 OR9N1P-201ENST00000491296 333 ntBASIC5.49□□□□□ -1.53
MMP13P45452 RN7SL447P-201ENST00000494711 245 ntBASIC5.49□□□□□ -1.53
MMP13P45452 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP13P45452 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP13P45452 AC106872.4-201ENST00000510050 523 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP13P45452 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP13P45452 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP13P45452 AC008126.1-201ENST00000549019 480 ntBASIC5.49□□□□□ -1.53
MMP13P45452 GLRXP2-201ENST00000555594 321 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP13P45452 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP13P45452 MIR4509-3-201ENST00000578671 94 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP13P45452 MIR4509-2-201ENST00000583920 94 ntBASIC5.49□□□□□ -1.53
MMP13P45452 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.49□□□□□ -1.53
MMP13P45452 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP13P45452 NIFKP6-201ENST00000598115 845 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AL358072.1-201ENST00000604156 575 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AC007204.2-201ENST00000615022 616 ntBASIC5.49□□□□□ -1.53
MMP13P45452 MIR4509-1-201ENST00000618224 94 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AC005840.5-201ENST00000619166 599 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AP003485.2-201ENST00000623636 610 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AP003476.1-201ENST00000623984 516 ntBASIC5.49□□□□□ -1.53
MMP13P45452 AL590396.4-201ENST00000636779 956 ntBASIC5.49□□□□□ -1.53
MMP13P45452 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MMP13P45452 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
MMP13P45452 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP13P45452 AL022393.1-201ENST00000625142 1677 ntBASIC5.49□□□□□ -1.53
MMP13P45452 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.49□□□□□ -1.53
MMP13P45452 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MMP13P45452 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.49□□□□□ -1.53
MMP13P45452 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.48□□□□□ -1.53
MMP13P45452 HSPD1P14-201ENST00000432666 1618 ntBASIC5.48□□□□□ -1.53
MMP13P45452 CDC27P2-201ENST00000425026 1922 ntBASIC5.48□□□□□ -1.53
MMP13P45452 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MMP13P45452 AL672167.1-204ENST00000641875 3017 ntBASIC5.48□□□□□ -1.53
MMP13P45452 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 Y_RNA.62-201ENST00000362840 99 ntBASIC5.48□□□□□ -1.53
MMP13P45452 RNU1-19P-201ENST00000363306 165 ntBASIC5.48□□□□□ -1.53
MMP13P45452 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 MTCO2P31-201ENST00000402702 684 ntBASIC5.48□□□□□ -1.53
MMP13P45452 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.48□□□□□ -1.53
MMP13P45452 RN7SKP16-201ENST00000410180 299 ntBASIC5.48□□□□□ -1.53
MMP13P45452 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.48□□□□□ -1.53
MMP13P45452 HSFY4P-201ENST00000415994 1181 ntBASIC5.48□□□□□ -1.53
MMP13P45452 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MMP13P45452 DSTNP5-201ENST00000427921 523 ntBASIC5.48□□□□□ -1.53
MMP13P45452 MTND5P25-201ENST00000430499 799 ntBASIC5.48□□□□□ -1.53
MMP13P45452 CYCSP6-201ENST00000434498 302 ntBASIC5.48□□□□□ -1.53
MMP13P45452 CYCSP12-201ENST00000437729 300 ntBASIC5.48□□□□□ -1.53
MMP13P45452 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.48□□□□□ -1.53
MMP13P45452 GTF3AP5-201ENST00000442645 697 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP13P45452 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 SETD6P1-201ENST00000444575 317 ntBASIC5.48□□□□□ -1.53
MMP13P45452 SUMO2P1-206ENST00000445436 284 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AL096829.2-201ENST00000446582 742 ntBASIC5.48□□□□□ -1.53
MMP13P45452 GAPDHP25-201ENST00000447061 1001 ntBASIC5.48□□□□□ -1.53
MMP13P45452 EIF2S2P2-201ENST00000447161 982 ntBASIC5.48□□□□□ -1.53
MMP13P45452 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.48□□□□□ -1.53
MMP13P45452 AL035090.1-201ENST00000454835 332 ntBASIC5.48□□□□□ -1.53
MMP13P45452 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 AC022360.1-201ENST00000521058 340 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.48□□□□□ -1.53
MMP13P45452 MTCO1P47-201ENST00000523889 1271 ntBASIC5.48□□□□□ -1.53
MMP13P45452 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.48□□□□□ -1.53
MMP13P45452 HMGB1P40-201ENST00000525121 540 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms