Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.98□□□□□ -1.61
HTTP42858 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HTTP42858 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HTTP42858 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC4.98□□□□□ -1.61
HTTP42858 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HTTP42858 AP000580.1-201ENST00000404439 358 ntBASIC4.98□□□□□ -1.61
HTTP42858 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.98□□□□□ -1.61
HTTP42858 PTMAP3-201ENST00000447474 330 ntBASIC4.98□□□□□ -1.61
HTTP42858 AC006499.5-201ENST00000505037 514 ntBASIC4.98□□□□□ -1.61
HTTP42858 AC010460.1-201ENST00000507087 466 ntBASIC4.98□□□□□ -1.61
HTTP42858 AC007991.1-201ENST00000522680 631 ntBASIC4.98□□□□□ -1.61
HTTP42858 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.98□□□□□ -1.61
HTTP42858 AC090181.2-201ENST00000602975 672 ntBASIC4.98□□□□□ -1.61
HTTP42858 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 LCOR-201ENST00000286067 4542 ntBASIC4.97□□□□□ -1.61
HTTP42858 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC4.97□□□□□ -1.61
HTTP42858 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.97□□□□□ -1.61
HTTP42858 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
HTTP42858 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.97□□□□□ -1.61
HTTP42858 AC007068.1-201ENST00000396690 844 ntBASIC4.97□□□□□ -1.61
HTTP42858 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.97□□□□□ -1.61
HTTP42858 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HTTP42858 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 IFITM8P-201ENST00000522529 394 ntBASIC4.97□□□□□ -1.61
HTTP42858 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.97□□□□□ -1.61
HTTP42858 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.97□□□□□ -1.61
HTTP42858 AL391261.4-201ENST00000616012 481 ntBASIC4.97□□□□□ -1.61
HTTP42858 AC015967.1-201ENST00000619893 476 ntBASIC4.97□□□□□ -1.61
HTTP42858 AC004158.1-201ENST00000564508 4319 ntBASIC4.97□□□□□ -1.61
HTTP42858 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.97□□□□□ -1.61
HTTP42858 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HTTP42858 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 NHS-204ENST00000615422 8860 ntTSL 5 BASIC4.97□□□□□ -1.61
HTTP42858 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.97□□□□□ -1.61
HTTP42858 SYF2P2-201ENST00000417620 583 ntBASIC4.97□□□□□ -1.61
HTTP42858 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.97□□□□□ -1.61
HTTP42858 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.97□□□□□ -1.61
HTTP42858 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.97□□□□□ -1.61
HTTP42858 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.97□□□□□ -1.61
HTTP42858 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HTTP42858 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 RN7SKP235-201ENST00000410662 305 ntBASIC4.97□□□□□ -1.61
HTTP42858 Z92545.1-201ENST00000411782 234 ntBASIC4.97□□□□□ -1.61
HTTP42858 AC091286.1-201ENST00000431233 461 ntBASIC4.97□□□□□ -1.61
HTTP42858 CYCSP32-201ENST00000440548 321 ntBASIC4.97□□□□□ -1.61
HTTP42858 AC110768.1-201ENST00000509222 400 ntBASIC4.97□□□□□ -1.61
HTTP42858 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HTTP42858 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
HTTP42858 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
HTTP42858 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
HTTP42858 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HTTP42858 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.96□□□□□ -1.62
HTTP42858 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 RN7SKP177-201ENST00000410567 355 ntBASIC4.96□□□□□ -1.62
HTTP42858 AC096664.2-201ENST00000411843 406 ntBASIC4.96□□□□□ -1.62
HTTP42858 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.96□□□□□ -1.62
HTTP42858 AC104651.2-201ENST00000447549 528 ntBASIC4.96□□□□□ -1.62
HTTP42858 ISCUP1-201ENST00000454451 448 ntBASIC4.96□□□□□ -1.62
HTTP42858 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.96□□□□□ -1.62
HTTP42858 AC136777.2-201ENST00000522979 358 ntBASIC4.96□□□□□ -1.62
HTTP42858 AP001267.4-201ENST00000602598 545 ntBASIC4.96□□□□□ -1.62
HTTP42858 SRGNP1-201ENST00000603392 451 ntBASIC4.96□□□□□ -1.62
HTTP42858 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.96□□□□□ -1.62
HTTP42858 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
HTTP42858 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.96□□□□□ -1.62
HTTP42858 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.96□□□□□ -1.62
HTTP42858 DYNLL1P4-201ENST00000549314 266 ntBASIC4.96□□□□□ -1.62
HTTP42858 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.96□□□□□ -1.62
HTTP42858 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.96□□□□□ -1.62
HTTP42858 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 AP001157.1-201ENST00000550837 2339 ntBASIC4.96□□□□□ -1.62
HTTP42858 ABCC13-202ENST00000463099 3842 ntBASIC4.96□□□□□ -1.62
HTTP42858 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
HTTP42858 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HTTP42858 AC006042.3-201ENST00000454684 1469 ntBASIC4.96□□□□□ -1.62
HTTP42858 AL672167.1-205ENST00000641112 3080 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms