Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC117525.1-201ENST00000515228 503 ntBASIC5.25□□□□□ -1.57
CHRNA3P32297 AC013701.1-201ENST00000522657 465 ntBASIC5.25□□□□□ -1.57
CHRNA3P32297 AC018442.3-201ENST00000523025 183 ntBASIC5.25□□□□□ -1.57
CHRNA3P32297 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA3P32297 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.25□□□□□ -1.57
CHRNA3P32297 CD24P2-201ENST00000565486 219 ntBASIC5.25□□□□□ -1.57
CHRNA3P32297 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.25□□□□□ -1.57
CHRNA3P32297 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA3P32297 AC027281.1-201ENST00000574178 758 ntBASIC5.25□□□□□ -1.57
CHRNA3P32297 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA3P32297 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA3P32297 AC012213.4-201ENST00000606457 354 ntBASIC5.25□□□□□ -1.57
CHRNA3P32297 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA3P32297 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA3P32297 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA3P32297 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA3P32297 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CHRNA3P32297 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.25□□□□□ -1.57
CHRNA3P32297 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CHRNA3P32297 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 THAP12P4-201ENST00000528321 2266 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 AC010132.2-201ENST00000295493 1043 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 SNURFL-201ENST00000309296 343 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 RNU4-4P-201ENST00000364588 130 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AL645733.1-201ENST00000402250 217 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 AL589647.1-201ENST00000402485 466 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AC093084.1-201ENST00000424233 687 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AL450023.3-201ENST00000440592 271 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 CYCSP34-201ENST00000458172 304 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA3P32297 RN7SKP147-201ENST00000517154 244 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA3P32297 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA3P32297 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA3P32297 CYCSP40-201ENST00000575927 294 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA3P32297 MIR4646-201ENST00000580775 63 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 AF117829.2-201ENST00000619538 361 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CHRNA3P32297 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA3P32297 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA3P32297 SCARNA15-201ENST00000607520 4325 ntBASIC5.24□□□□□ -1.57
CHRNA3P32297 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA3P32297 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CHRNA3P32297 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CHRNA3P32297 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA3P32297 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CHRNA3P32297 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA3P32297 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA3P32297 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA3P32297 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA3P32297 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.23□□□□□ -1.57
CHRNA3P32297 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA3P32297 EI24P3-201ENST00000399046 1062 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA3P32297 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA3P32297 EIF4A1P1-201ENST00000420241 934 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA3P32297 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA3P32297 RPS26P4-201ENST00000431743 355 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 PSMD10P3-201ENST00000437000 448 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA3P32297 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA3P32297 RPL12P3-201ENST00000440080 396 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA3P32297 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 RPS17P2-201ENST00000461663 408 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 AC112206.1-201ENST00000468416 477 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA3P32297 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA3P32297 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA3P32297 AC009303.3-201ENST00000591103 736 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 AC007620.3-201ENST00000608131 497 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 AC133644.2-201ENST00000608142 540 ntBASIC5.23□□□□□ -1.57
CHRNA3P32297 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA3P32297 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms