Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMBP28068 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 KCTD9P6-201ENST00000522306 950 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMBP28068 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 MIR4646-201ENST00000580775 63 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 AC119501.1-201ENST00000603646 475 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMBP28068 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 AL121890.2-201ENST00000617644 465 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 AC087821.1-201ENST00000623639 567 ntBASIC3.74□□□□□ -1.81
HLA-DMBP28068 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMBP28068 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HLA-DMBP28068 AP001273.1-201ENST00000624493 3152 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC131971.1-201ENST00000332881 1482 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 CASC19-281ENST00000642118 1554 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 RNA5SP455-201ENST00000365190 119 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AL672167.2-201ENST00000377164 879 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 SNORA66-201ENST00000384792 133 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AL589647.1-201ENST00000402485 466 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 RGS17P1-201ENST00000423358 553 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 NPM1P48-201ENST00000436002 853 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AL354714.3-201ENST00000447284 493 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 RHEBP2-201ENST00000450289 600 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 RNA5SP464-201ENST00000516251 108 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC026688.1-201ENST00000520639 1168 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC013701.1-201ENST00000522657 465 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC087477.6-201ENST00000559595 843 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC104687.2-201ENST00000604442 342 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 EIF3FP1-201ENST00000613970 806 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 AL049794.2-201ENST00000616301 365 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 LINC00901.1-201ENST00000617252 152 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 LINC01739-205ENST00000641890 573 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AC053481.2-202ENST00000582394 1500 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AL592182.3-201ENST00000642132 3304 ntBASIC3.73□□□□□ -1.81
HLA-DMBP28068 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMBP28068 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMBP28068 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 ECM1P2-201ENST00000503354 1577 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC073429.2-201ENST00000569694 1444 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 RNU4-4P-201ENST00000364588 130 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DMBP28068 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 MIR937-201ENST00000401271 86 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AL357515.1-201ENST00000402967 542 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DMBP28068 TMBIM7P-201ENST00000418074 855 ntBASIC3.72□□□□□ -1.81
HLA-DMBP28068 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms