Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
VARSP26640 AC011008.2-201ENST00000624866 3352 ntBASIC7.34□□□□□ -1.23
VARSP26640 AC090643.1-201ENST00000623600 3100 ntBASIC7.34□□□□□ -1.24
VARSP26640 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.34□□□□□ -1.24
VARSP26640 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 CUBNP3-201ENST00000457461 1784 ntBASIC7.33□□□□□ -1.24
VARSP26640 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 AP000866.6-201ENST00000638898 3579 ntBASIC7.33□□□□□ -1.24
VARSP26640 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 AC090132.1-201ENST00000524071 1480 ntBASIC7.33□□□□□ -1.24
VARSP26640 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 NACAP2-201ENST00000318548 624 ntBASIC7.33□□□□□ -1.24
VARSP26640 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
VARSP26640 PSMA6P1-201ENST00000400275 741 ntBASIC7.33□□□□□ -1.24
VARSP26640 RPL34P19-201ENST00000415903 342 ntBASIC7.33□□□□□ -1.24
VARSP26640 AC023141.1-201ENST00000419418 379 ntBASIC7.33□□□□□ -1.24
VARSP26640 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 AL138479.1-201ENST00000426913 484 ntBASIC7.33□□□□□ -1.24
VARSP26640 AC002504.1-201ENST00000438281 691 ntBASIC7.33□□□□□ -1.24
VARSP26640 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 BNIP3P2-201ENST00000441221 577 ntBASIC7.33□□□□□ -1.24
VARSP26640 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 RPL12P40-201ENST00000467028 488 ntBASIC7.33□□□□□ -1.24
VARSP26640 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 RN7SL145P-201ENST00000469955 296 ntBASIC7.33□□□□□ -1.24
VARSP26640 AC005550.2-201ENST00000476382 318 ntBASIC7.33□□□□□ -1.24
VARSP26640 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 RNU6-150P-201ENST00000516237 95 ntBASIC7.33□□□□□ -1.24
VARSP26640 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 AP003122.3-201ENST00000526316 255 ntBASIC7.33□□□□□ -1.24
VARSP26640 PSMA2P1-201ENST00000526365 646 ntBASIC7.33□□□□□ -1.24
VARSP26640 AP003181.2-201ENST00000528941 181 ntBASIC7.33□□□□□ -1.24
VARSP26640 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.33□□□□□ -1.24
VARSP26640 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.33□□□□□ -1.24
VARSP26640 RN7SL786P-201ENST00000579130 298 ntBASIC7.33□□□□□ -1.24
VARSP26640 RN7SL697P-201ENST00000582484 299 ntBASIC7.33□□□□□ -1.24
VARSP26640 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 AC087763.1-201ENST00000603391 286 ntBASIC7.33□□□□□ -1.24
VARSP26640 AC115621.1-201ENST00000604653 858 ntBASIC7.33□□□□□ -1.24
VARSP26640 AL365434.2-201ENST00000607979 234 ntBASIC7.33□□□□□ -1.24
VARSP26640 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.33□□□□□ -1.24
VARSP26640 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.33□□□□□ -1.24
VARSP26640 MAPK10-270ENST00000641102 3538 ntBASIC7.33□□□□□ -1.24
VARSP26640 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 AC012213.2-201ENST00000562917 4597 ntBASIC7.33□□□□□ -1.24
VARSP26640 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.33□□□□□ -1.24
VARSP26640 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VARSP26640 NBPF8-201ENST00000583271 5330 ntBASIC7.32□□□□□ -1.24
VARSP26640 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VARSP26640 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VARSP26640 SAMMSON-222ENST00000641901 2727 ntBASIC7.32□□□□□ -1.24
VARSP26640 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
VARSP26640 NF1P8-201ENST00000415351 1461 ntBASIC7.32□□□□□ -1.24
VARSP26640 AC083806.2-201ENST00000617795 2685 ntBASIC7.32□□□□□ -1.24
VARSP26640 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.32□□□□□ -1.24
VARSP26640 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.32□□□□□ -1.24
VARSP26640 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VARSP26640 Y_RNA.31-201ENST00000362574 102 ntBASIC7.32□□□□□ -1.24
VARSP26640 RNU1-122P-201ENST00000365538 156 ntBASIC7.32□□□□□ -1.24
VARSP26640 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.32□□□□□ -1.24
VARSP26640 RNU6-456P-201ENST00000384493 107 ntBASIC7.32□□□□□ -1.24
VARSP26640 AC023141.10-201ENST00000415634 200 ntBASIC7.32□□□□□ -1.24
VARSP26640 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.32□□□□□ -1.24
VARSP26640 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.32□□□□□ -1.24
VARSP26640 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms