Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL450226.2-201ENST00000622913 439 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.43□□□□□ -1.22
RFX1P22670 CR381653.2-201ENST00000624041 768 ntBASIC7.43□□□□□ -1.22
RFX1P22670 AC231657.1-201ENST00000624313 397 ntBASIC7.43□□□□□ -1.22
RFX1P22670 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
RFX1P22670 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 DCAF13P1-201ENST00000495256 1330 ntBASIC7.43□□□□□ -1.22
RFX1P22670 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.43□□□□□ -1.22
RFX1P22670 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX1P22670 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 MTND4P16-201ENST00000466108 1367 ntBASIC7.43□□□□□ -1.22
RFX1P22670 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 OR4G11P-202ENST00000642116 1414 ntBASIC7.43□□□□□ -1.22
RFX1P22670 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFX1P22670 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.43□□□□□ -1.22
RFX1P22670 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.43□□□□□ -1.22
RFX1P22670 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.42□□□□□ -1.22
RFX1P22670 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 MTCO1P14-201ENST00000441695 1559 ntBASIC7.42□□□□□ -1.22
RFX1P22670 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RFX1P22670 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.42□□□□□ -1.22
RFX1P22670 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 AC090017.1-201ENST00000548612 1779 ntBASIC7.42□□□□□ -1.22
RFX1P22670 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RFX1P22670 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.42□□□□□ -1.22
RFX1P22670 MIR1282-201ENST00000408865 101 ntBASIC7.42□□□□□ -1.22
RFX1P22670 AL139128.1-201ENST00000413921 941 ntBASIC7.42□□□□□ -1.22
RFX1P22670 MTND4LP17-201ENST00000414607 293 ntBASIC7.42□□□□□ -1.22
RFX1P22670 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 USP9YP13-201ENST00000417797 480 ntBASIC7.42□□□□□ -1.22
RFX1P22670 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.42□□□□□ -1.22
RFX1P22670 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 AC004865.1-201ENST00000442276 1003 ntBASIC7.42□□□□□ -1.22
RFX1P22670 RAB11AP1-201ENST00000442978 646 ntBASIC7.42□□□□□ -1.22
RFX1P22670 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.42□□□□□ -1.22
RFX1P22670 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 AC016724.1-201ENST00000453215 421 ntBASIC7.42□□□□□ -1.22
RFX1P22670 RPL26P30-201ENST00000453533 435 ntBASIC7.42□□□□□ -1.22
RFX1P22670 RPL37P3-201ENST00000456825 293 ntBASIC7.42□□□□□ -1.22
RFX1P22670 snoU109.1-201ENST00000459339 135 ntBASIC7.42□□□□□ -1.22
RFX1P22670 IGKV2D-38-201ENST00000518423 240 ntBASIC7.42□□□□□ -1.22
RFX1P22670 IGLVIV-64-201ENST00000518581 301 ntBASIC7.42□□□□□ -1.22
RFX1P22670 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 AC116917.1-201ENST00000520558 305 ntBASIC7.42□□□□□ -1.22
RFX1P22670 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.42□□□□□ -1.22
RFX1P22670 AC068587.4-201ENST00000533893 186 ntBASIC7.42□□□□□ -1.22
RFX1P22670 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.42□□□□□ -1.22
RFX1P22670 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 AC124947.2-202ENST00000552735 133 ntBASIC7.42□□□□□ -1.22
RFX1P22670 HSPE1P2-201ENST00000554777 306 ntBASIC7.42□□□□□ -1.22
RFX1P22670 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.42□□□□□ -1.22
RFX1P22670 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.42□□□□□ -1.22
RFX1P22670 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.42□□□□□ -1.22
RFX1P22670 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 AC008115.3-201ENST00000614874 549 ntBASIC7.42□□□□□ -1.22
RFX1P22670 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 AC008626.2-201ENST00000624425 248 ntBASIC7.42□□□□□ -1.22
RFX1P22670 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 MAPK10-357ENST00000641831 2858 ntBASIC7.42□□□□□ -1.22
RFX1P22670 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 RAD17P2-201ENST00000451754 1977 ntBASIC7.42□□□□□ -1.22
RFX1P22670 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 AC022819.1-201ENST00000563495 3910 ntBASIC7.42□□□□□ -1.22
RFX1P22670 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RFX1P22670 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.42□□□□□ -1.22
RFX1P22670 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
RFX1P22670 AC130360.2-201ENST00000533477 1556 ntBASIC7.42□□□□□ -1.22
RFX1P22670 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.41□□□□□ -1.22
RFX1P22670 BX284613.1-201ENST00000452221 1641 ntBASIC7.41□□□□□ -1.22
RFX1P22670 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms