Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL3P19876 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL3P19876 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL3P19876 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4□□□□□ -1.77
CXCL3P19876 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4□□□□□ -1.77
CXCL3P19876 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4□□□□□ -1.77
CXCL3P19876 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4□□□□□ -1.77
CXCL3P19876 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4□□□□□ -1.77
CXCL3P19876 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
CXCL3P19876 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CXCL3P19876 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CXCL3P19876 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL3P19876 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL3P19876 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL3P19876 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL3P19876 RNA5SP513-201ENST00000364648 118 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CXCL3P19876 RNA5SP284-201ENST00000384547 118 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL3P19876 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL3P19876 AC013470.3-201ENST00000420252 1194 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 LINC00993-201ENST00000420453 540 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 RPS12P5-201ENST00000423449 371 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 NANOGP6-201ENST00000429190 847 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL3P19876 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL3P19876 RAB9AP5-201ENST00000437794 597 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AL450263.2-201ENST00000439400 589 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 RAB9AP2-201ENST00000443911 597 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL3P19876 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL3P19876 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL3P19876 NDUFA5P5-201ENST00000468361 342 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AC094085.1-201ENST00000468914 584 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 RN7SL741P-201ENST00000482473 289 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AC090013.1-201ENST00000485147 480 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 PSMA2P2-201ENST00000504319 686 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 SNORD46.2-201ENST00000516021 102 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 RN7SKP70-201ENST00000516655 271 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL3P19876 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL3P19876 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL3P19876 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL3P19876 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.99□□□□□ -1.77
CXCL3P19876 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL3P19876 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL3P19876 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL3P19876 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL3P19876 AL591926.8-201ENST00000616876 211 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AC074276.2-201ENST00000619891 348 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AC087821.1-201ENST00000623639 567 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AP003499.2-201ENST00000624100 483 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 AC067931.1-201ENST00000624190 671 ntBASIC3.99□□□□□ -1.77
CXCL3P19876 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL3P19876 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL3P19876 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL3P19876 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL3P19876 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL3P19876 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CXCL3P19876 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL3P19876 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL3P19876 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL3P19876 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL3P19876 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL3P19876 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CXCL3P19876 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CXCL3P19876 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL3P19876 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CXCL3P19876 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL3P19876 AC067945.1-201ENST00000342609 618 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL3P19876 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.98□□□□□ -1.77
CXCL3P19876 RNA5SP319-201ENST00000362768 119 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL3P19876 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL3P19876 VN1R31P-201ENST00000417498 730 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 HLA-N-201ENST00000437516 135 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 AC064862.4-201ENST00000442180 334 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL3P19876 RPS27AP15-201ENST00000447672 466 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 RPL7L1P1-201ENST00000448259 785 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 AC104306.1-201ENST00000449702 371 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL3P19876 AL451050.1-201ENST00000450126 415 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.98□□□□□ -1.77
CXCL3P19876 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 AC010350.1-201ENST00000504908 231 ntBASIC3.98□□□□□ -1.77
CXCL3P19876 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.98□□□□□ -1.77
CXCL3P19876 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms