Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 NMNAT1P5-201ENST00000559657 841 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.08□□□□□ -1.28
LIG1P18858 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.08□□□□□ -1.28
LIG1P18858 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.08□□□□□ -1.28
LIG1P18858 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 MIR548S-201ENST00000581352 82 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AC006539.2-201ENST00000601729 572 ntBASIC7.08□□□□□ -1.28
LIG1P18858 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.08□□□□□ -1.28
LIG1P18858 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AL645933.2-201ENST00000606743 1207 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.08□□□□□ -1.28
LIG1P18858 AL592148.2-201ENST00000612210 372 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.08□□□□□ -1.28
LIG1P18858 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.08□□□□□ -1.28
LIG1P18858 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.08□□□□□ -1.28
LIG1P18858 AL121873.1-201ENST00000616013 524 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC016769.4-201ENST00000616893 535 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC069234.4-201ENST00000621276 412 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AC095031.1-201ENST00000623685 672 ntBASIC7.08□□□□□ -1.28
LIG1P18858 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.08□□□□□ -1.28
LIG1P18858 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LIG1P18858 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.08□□□□□ -1.28
LIG1P18858 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.08□□□□□ -1.28
LIG1P18858 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LIG1P18858 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
LIG1P18858 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LIG1P18858 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.08□□□□□ -1.28
LIG1P18858 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LIG1P18858 MTCO1P18-201ENST00000455518 1419 ntBASIC7.08□□□□□ -1.28
LIG1P18858 AL359955.1-201ENST00000455242 3275 ntBASIC7.07□□□□□ -1.28
LIG1P18858 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.07□□□□□ -1.28
LIG1P18858 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC7.07□□□□□ -1.28
LIG1P18858 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.07□□□□□ -1.28
LIG1P18858 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 AL672167.1-206ENST00000356293 943 ntBASIC7.07□□□□□ -1.28
LIG1P18858 RNU6-560P-201ENST00000364007 108 ntBASIC7.07□□□□□ -1.28
LIG1P18858 Y_RNA.248-201ENST00000364501 109 ntBASIC7.07□□□□□ -1.28
LIG1P18858 snoZ40.1-201ENST00000364540 72 ntBASIC7.07□□□□□ -1.28
LIG1P18858 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
LIG1P18858 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
LIG1P18858 AC136624.1-201ENST00000400791 413 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AL079342.2-201ENST00000403367 482 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.07□□□□□ -1.28
LIG1P18858 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.07□□□□□ -1.28
LIG1P18858 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.07□□□□□ -1.28
LIG1P18858 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.07□□□□□ -1.28
LIG1P18858 AC009784.1-201ENST00000426484 460 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AL139415.2-201ENST00000431968 163 ntBASIC7.07□□□□□ -1.28
LIG1P18858 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AC009263.1-201ENST00000441193 1239 ntBASIC7.07□□□□□ -1.28
LIG1P18858 CXCR2P1-202ENST00000443392 1074 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.07□□□□□ -1.28
LIG1P18858 AL671855.1-201ENST00000446875 1203 ntBASIC7.07□□□□□ -1.28
LIG1P18858 IGBP1P3-201ENST00000447449 1000 ntBASIC7.07□□□□□ -1.28
LIG1P18858 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.07□□□□□ -1.28
LIG1P18858 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.07□□□□□ -1.28
LIG1P18858 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.07□□□□□ -1.28
LIG1P18858 RN7SL568P-201ENST00000493069 298 ntBASIC7.07□□□□□ -1.28
LIG1P18858 RN7SL649P-201ENST00000496974 275 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AC084024.2-201ENST00000503480 791 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.07□□□□□ -1.28
LIG1P18858 AC112484.3-201ENST00000505910 329 ntBASIC7.07□□□□□ -1.28
LIG1P18858 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.07□□□□□ -1.28
LIG1P18858 TBCA-206ENST00000518338 551 ntTSL 2 BASIC7.07□□□□□ -1.28
LIG1P18858 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.07□□□□□ -1.28
LIG1P18858 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.07□□□□□ -1.28
LIG1P18858 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.07□□□□□ -1.28
LIG1P18858 AC011260.1-201ENST00000578420 472 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.07□□□□□ -1.28
LIG1P18858 MIR132-201ENST00000591554 101 ntBASIC7.07□□□□□ -1.28
LIG1P18858 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 Z99129.1-201ENST00000612510 255 ntBASIC7.07□□□□□ -1.28
LIG1P18858 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC7.07□□□□□ -1.28
LIG1P18858 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LIG1P18858 PSG10P-201ENST00000501199 1500 ntBASIC7.06□□□□□ -1.28
LIG1P18858 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 MTND4P31-201ENST00000425607 1343 ntBASIC7.06□□□□□ -1.28
LIG1P18858 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 Z95114.1-201ENST00000624264 14574 ntBASIC7.06□□□□□ -1.28
LIG1P18858 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
LIG1P18858 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms