Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGA1P17096 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HMGA1P17096 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HMGA1P17096 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGA1P17096 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGA1P17096 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGA1P17096 IGKV7-3-201ENST00000357453 298 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.85□□□□□ -1.63
HMGA1P17096 AP000580.1-201ENST00000404439 358 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 HMGN2P27-201ENST00000427352 270 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 AC004938.1-201ENST00000438468 308 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 TPT1P12-201ENST00000448968 492 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGA1P17096 RN7SL385P-201ENST00000468873 276 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 NPM1P28-201ENST00000492269 840 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGA1P17096 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.85□□□□□ -1.63
HMGA1P17096 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGA1P17096 AC002044.3-201ENST00000623314 541 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGA1P17096 AC119674.1-217ENST00000641942 1086 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGA1P17096 AC104623.2-202ENST00000623477 4002 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGA1P17096 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGA1P17096 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGA1P17096 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGA1P17096 AC073136.1-201ENST00000449426 2884 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGA1P17096 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGA1P17096 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGA1P17096 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGA1P17096 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
HMGA1P17096 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGA1P17096 AC135352.1-201ENST00000506173 1418 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGA1P17096 SNORA71.2-201ENST00000364941 134 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 RPL23AP59-201ENST00000399415 461 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGA1P17096 RPL12P34-201ENST00000424532 479 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGA1P17096 RPL21P133-201ENST00000443666 476 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGA1P17096 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGA1P17096 AC090686.1-201ENST00000481577 749 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 NIP7P2-201ENST00000485801 544 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGA1P17096 OR8G5-201ENST00000524943 1041 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGA1P17096 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGA1P17096 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGA1P17096 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.84□□□□□ -1.63
HMGA1P17096 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGA1P17096 AL133243.1-201ENST00000614487 366 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 AC005899.7-201ENST00000618199 588 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 AL731566.2-201ENST00000618971 317 ntBASIC4.84□□□□□ -1.63
HMGA1P17096 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGA1P17096 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGA1P17096 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMGA1P17096 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
HMGA1P17096 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMGA1P17096 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMGA1P17096 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGA1P17096 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGA1P17096 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
HMGA1P17096 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGA1P17096 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGA1P17096 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGA1P17096 OR1F12-201ENST00000402365 945 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 Z98745.1-201ENST00000402553 494 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 RPL7AP25-201ENST00000423357 805 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 CKS1BP6-201ENST00000424932 240 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGA1P17096 AC023141.6-201ENST00000429418 337 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 AC073143.1-201ENST00000436316 395 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGA1P17096 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGA1P17096 Z95152.1-201ENST00000453556 656 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGA1P17096 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGA1P17096 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGA1P17096 AC012409.3-201ENST00000611343 981 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 AC015804.1-201ENST00000622935 435 ntBASIC4.83□□□□□ -1.64
HMGA1P17096 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGA1P17096 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HMGA1P17096 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGA1P17096 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGA1P17096 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
HMGA1P17096 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HMGA1P17096 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 AC108467.2-201ENST00000617640 1597 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 AP000473.2-201ENST00000602659 1537 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HMGA1P17096 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGA1P17096 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGA1P17096 AC108751.5-201ENST00000492880 1336 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
HMGA1P17096 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGA1P17096 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGA1P17096 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms