Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.59□□□□□ -1.67
NCK1P16333 AC108075.1-201ENST00000424692 529 ntBASIC4.59□□□□□ -1.67
NCK1P16333 RPL7L1P9-201ENST00000431298 745 ntBASIC4.59□□□□□ -1.67
NCK1P16333 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.59□□□□□ -1.67
NCK1P16333 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.59□□□□□ -1.67
NCK1P16333 RPL12P11-201ENST00000439970 501 ntBASIC4.59□□□□□ -1.67
NCK1P16333 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.59□□□□□ -1.67
NCK1P16333 MRPL48P1-201ENST00000445390 636 ntBASIC4.59□□□□□ -1.67
NCK1P16333 AL354714.3-201ENST00000447284 493 ntBASIC4.59□□□□□ -1.67
NCK1P16333 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.59□□□□□ -1.67
NCK1P16333 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.59□□□□□ -1.67
NCK1P16333 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NCK1P16333 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.59□□□□□ -1.67
NCK1P16333 RN7SL466P-201ENST00000497546 295 ntBASIC4.59□□□□□ -1.67
NCK1P16333 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
NCK1P16333 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.59□□□□□ -1.67
NCK1P16333 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.59□□□□□ -1.67
NCK1P16333 AC024940.3-201ENST00000538551 316 ntBASIC4.59□□□□□ -1.67
NCK1P16333 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.59□□□□□ -1.67
NCK1P16333 AC008147.3-201ENST00000548666 354 ntBASIC4.59□□□□□ -1.67
NCK1P16333 BTBD10P1-201ENST00000549824 1352 ntBASIC4.59□□□□□ -1.67
NCK1P16333 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NCK1P16333 DPRXP4-201ENST00000578053 568 ntBASIC4.59□□□□□ -1.67
NCK1P16333 AC005726.4-201ENST00000582858 458 ntBASIC4.59□□□□□ -1.67
NCK1P16333 MIR4310-201ENST00000582950 57 ntBASIC4.59□□□□□ -1.67
NCK1P16333 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NCK1P16333 AC020915.5-201ENST00000596836 964 ntBASIC4.59□□□□□ -1.67
NCK1P16333 GMCL1P2-201ENST00000605230 823 ntBASIC4.59□□□□□ -1.67
NCK1P16333 RNA5SP440-201ENST00000612665 119 ntBASIC4.59□□□□□ -1.67
NCK1P16333 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.59□□□□□ -1.67
NCK1P16333 uc_338.18-201ENST00000615451 175 ntBASIC4.59□□□□□ -1.67
NCK1P16333 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
NCK1P16333 AC005086.4-201ENST00000623065 213 ntBASIC4.59□□□□□ -1.67
NCK1P16333 AL445437.1-201ENST00000623157 3087 ntBASIC4.59□□□□□ -1.67
NCK1P16333 AC083843.3-201ENST00000623679 2186 ntBASIC4.59□□□□□ -1.67
NCK1P16333 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.59□□□□□ -1.67
NCK1P16333 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.59□□□□□ -1.67
NCK1P16333 AC087190.4-201ENST00000574616 8334 ntBASIC4.59□□□□□ -1.67
NCK1P16333 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
NCK1P16333 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NCK1P16333 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NCK1P16333 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 AP001273.1-201ENST00000624493 3152 ntBASIC4.58□□□□□ -1.68
NCK1P16333 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 AL445487.1-201ENST00000415694 1580 ntBASIC4.58□□□□□ -1.68
NCK1P16333 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 RNU4-23P-201ENST00000362839 140 ntBASIC4.58□□□□□ -1.68
NCK1P16333 U3.2-201ENST00000362981 210 ntBASIC4.58□□□□□ -1.68
NCK1P16333 RNU4-44P-201ENST00000363050 141 ntBASIC4.58□□□□□ -1.68
NCK1P16333 RNU6-891P-201ENST00000384280 111 ntBASIC4.58□□□□□ -1.68
NCK1P16333 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.58□□□□□ -1.68
NCK1P16333 AL139039.2-201ENST00000407436 479 ntBASIC4.58□□□□□ -1.68
NCK1P16333 SNORA11.3-201ENST00000408471 128 ntBASIC4.58□□□□□ -1.68
NCK1P16333 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.58□□□□□ -1.68
NCK1P16333 OR6K4P-201ENST00000423179 955 ntBASIC4.58□□□□□ -1.68
NCK1P16333 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.58□□□□□ -1.68
NCK1P16333 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.58□□□□□ -1.68
NCK1P16333 AL591363.1-201ENST00000450091 483 ntBASIC4.58□□□□□ -1.68
NCK1P16333 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.58□□□□□ -1.68
NCK1P16333 RN7SL809P-201ENST00000482040 297 ntBASIC4.58□□□□□ -1.68
NCK1P16333 RN7SL184P-201ENST00000488308 297 ntBASIC4.58□□□□□ -1.68
NCK1P16333 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.58□□□□□ -1.68
NCK1P16333 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.58□□□□□ -1.68
NCK1P16333 EIF1AXP2-201ENST00000555940 413 ntBASIC4.58□□□□□ -1.68
NCK1P16333 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.58□□□□□ -1.68
NCK1P16333 AC079075.1-201ENST00000559543 878 ntBASIC4.58□□□□□ -1.68
NCK1P16333 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.58□□□□□ -1.68
NCK1P16333 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.58□□□□□ -1.68
NCK1P16333 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.58□□□□□ -1.68
NCK1P16333 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.58□□□□□ -1.68
NCK1P16333 AP001542.1-201ENST00000591314 200 ntBASIC4.58□□□□□ -1.68
NCK1P16333 MIR6778-201ENST00000617912 73 ntBASIC4.58□□□□□ -1.68
NCK1P16333 SNORA11.6-201ENST00000619030 128 ntBASIC4.58□□□□□ -1.68
NCK1P16333 AL022401.1-201ENST00000619498 108 ntBASIC4.58□□□□□ -1.68
NCK1P16333 AC019206.1-201ENST00000621938 425 ntBASIC4.58□□□□□ -1.68
NCK1P16333 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.58□□□□□ -1.68
NCK1P16333 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NCK1P16333 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NCK1P16333 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
NCK1P16333 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
NCK1P16333 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCK1P16333 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NCK1P16333 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCK1P16333 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCK1P16333 RNU1-43P-201ENST00000365052 165 ntBASIC4.57□□□□□ -1.68
NCK1P16333 MT-TP-201ENST00000387461 68 ntBASIC4.57□□□□□ -1.68
NCK1P16333 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.57□□□□□ -1.68
NCK1P16333 VDAC2P1-201ENST00000399358 958 ntBASIC4.57□□□□□ -1.68
NCK1P16333 AL080315.1-201ENST00000406055 466 ntBASIC4.57□□□□□ -1.68
NCK1P16333 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NCK1P16333 RN7SKP126-201ENST00000411143 300 ntBASIC4.57□□□□□ -1.68
NCK1P16333 HMGB1P32-201ENST00000425971 565 ntBASIC4.57□□□□□ -1.68
NCK1P16333 NPM1P26-201ENST00000426339 738 ntBASIC4.57□□□□□ -1.68
NCK1P16333 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.57□□□□□ -1.68
NCK1P16333 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms