Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL5A2P05997 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL5A2P05997 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL5A2P05997 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL5A2P05997 AC007998.4-201ENST00000612496 2533 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL5A2P05997 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL5A2P05997 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.15□□□□□ -1.43
COL5A2P05997 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL5A2P05997 RN7SKP224-201ENST00000364140 325 ntBASIC6.15□□□□□ -1.43
COL5A2P05997 CYP4F29P-201ENST00000420685 446 ntBASIC6.15□□□□□ -1.43
COL5A2P05997 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.15□□□□□ -1.43
COL5A2P05997 Z95327.1-201ENST00000446082 482 ntBASIC6.15□□□□□ -1.43
COL5A2P05997 AC090142.1-201ENST00000465776 462 ntBASIC6.15□□□□□ -1.43
COL5A2P05997 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.15□□□□□ -1.43
COL5A2P05997 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL5A2P05997 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.15□□□□□ -1.43
COL5A2P05997 SNORA31.9-201ENST00000516429 84 ntBASIC6.15□□□□□ -1.43
COL5A2P05997 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.15□□□□□ -1.43
COL5A2P05997 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.15□□□□□ -1.43
COL5A2P05997 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.15□□□□□ -1.43
COL5A2P05997 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.15□□□□□ -1.43
COL5A2P05997 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.15□□□□□ -1.43
COL5A2P05997 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL5A2P05997 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL5A2P05997 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.14□□□□□ -1.43
COL5A2P05997 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL5A2P05997 BCORP1-203ENST00000513194 5093 ntBASIC6.14□□□□□ -1.43
COL5A2P05997 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
COL5A2P05997 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
COL5A2P05997 RNU1-94P-201ENST00000362627 173 ntBASIC6.14□□□□□ -1.43
COL5A2P05997 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
COL5A2P05997 PPIAP31-201ENST00000405422 495 ntBASIC6.14□□□□□ -1.43
COL5A2P05997 AMZ2P2-201ENST00000406819 1057 ntBASIC6.14□□□□□ -1.43
COL5A2P05997 AC021876.1-201ENST00000425959 359 ntBASIC6.14□□□□□ -1.43
COL5A2P05997 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.14□□□□□ -1.43
COL5A2P05997 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.14□□□□□ -1.43
COL5A2P05997 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.14□□□□□ -1.43
COL5A2P05997 PSMB7P1-201ENST00000556349 514 ntBASIC6.14□□□□□ -1.43
COL5A2P05997 AC022916.3-201ENST00000592961 742 ntBASIC6.14□□□□□ -1.43
COL5A2P05997 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.14□□□□□ -1.43
COL5A2P05997 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.14□□□□□ -1.43
COL5A2P05997 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL5A2P05997 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.14□□□□□ -1.43
COL5A2P05997 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL5A2P05997 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
COL5A2P05997 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.13□□□□□ -1.43
COL5A2P05997 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
COL5A2P05997 ICE2P1-201ENST00000512800 1849 ntBASIC6.13□□□□□ -1.43
COL5A2P05997 AL121950.1-201ENST00000624993 2077 ntBASIC6.13□□□□□ -1.43
COL5A2P05997 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.13□□□□□ -1.43
COL5A2P05997 AC105137.1-201ENST00000484355 562 ntBASIC6.13□□□□□ -1.43
COL5A2P05997 NIFKP7-201ENST00000503365 834 ntBASIC6.13□□□□□ -1.43
COL5A2P05997 SAP18P1-201ENST00000512058 390 ntBASIC6.13□□□□□ -1.43
COL5A2P05997 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
COL5A2P05997 RN7SL176P-201ENST00000580352 264 ntBASIC6.13□□□□□ -1.43
COL5A2P05997 PRELID3BP3-201ENST00000584963 545 ntBASIC6.13□□□□□ -1.43
COL5A2P05997 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.13□□□□□ -1.43
COL5A2P05997 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.13□□□□□ -1.43
COL5A2P05997 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.13□□□□□ -1.43
COL5A2P05997 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.13□□□□□ -1.43
COL5A2P05997 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.13□□□□□ -1.43
COL5A2P05997 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.13□□□□□ -1.43
COL5A2P05997 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.13□□□□□ -1.43
COL5A2P05997 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.13□□□□□ -1.43
COL5A2P05997 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL5A2P05997 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL5A2P05997 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
COL5A2P05997 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
COL5A2P05997 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL5A2P05997 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL5A2P05997 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL5A2P05997 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.12□□□□□ -1.43
COL5A2P05997 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.12□□□□□ -1.43
COL5A2P05997 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL5A2P05997 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL5A2P05997 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
COL5A2P05997 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.12□□□□□ -1.43
COL5A2P05997 RNA5SP171-201ENST00000391071 115 ntBASIC6.12□□□□□ -1.43
COL5A2P05997 RPS21P8-201ENST00000413365 247 ntBASIC6.12□□□□□ -1.43
COL5A2P05997 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.12□□□□□ -1.43
COL5A2P05997 AP001324.1-201ENST00000428553 399 ntBASIC6.12□□□□□ -1.43
COL5A2P05997 HSFY6P-201ENST00000445573 403 ntBASIC6.12□□□□□ -1.43
COL5A2P05997 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.12□□□□□ -1.43
COL5A2P05997 AC090058.1-201ENST00000498788 435 ntBASIC6.12□□□□□ -1.43
COL5A2P05997 AC108475.1-201ENST00000507880 950 ntBASIC6.12□□□□□ -1.43
COL5A2P05997 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.12□□□□□ -1.43
COL5A2P05997 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.12□□□□□ -1.43
COL5A2P05997 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.12□□□□□ -1.43
COL5A2P05997 AL031119.1-201ENST00000404707 1879 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms