Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 CYCSP34-201ENST00000458172 304 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC108751.2-201ENST00000469993 231 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 RPL36AP41-201ENST00000493820 306 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC138938.1-201ENST00000515431 782 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 RNU6-513P-201ENST00000516104 104 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC079075.1-201ENST00000559543 878 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AC073091.2-201ENST00000603205 907 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AL049539.1-201ENST00000611964 459 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AF117829.2-201ENST00000619538 361 ntBASIC4.75□□□□□ -1.65
HLA-DQB2P05538 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DQB2P05538 AL672167.1-203ENST00000641299 2975 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 RN7SKP267-201ENST00000410381 285 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 ATG4AP1-201ENST00000416893 538 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 H2AFZP5-201ENST00000446960 382 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 AL645937.3-201ENST00000453647 936 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 AC112206.1-201ENST00000468416 477 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 AC011005.3-201ENST00000491624 395 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 OR5M2P-201ENST00000529003 936 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 MIR4480-201ENST00000582492 71 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 Mico1.1-201ENST00000611698 204 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 AP001784.1-201ENST00000624107 428 ntBASIC4.74□□□□□ -1.65
HLA-DQB2P05538 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DQB2P05538 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 AL133268.1-201ENST00000405676 1401 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 AC133552.1-201ENST00000569988 4007 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 UBBP2-201ENST00000376781 231 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 MIR1271-201ENST00000408537 86 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 RPS4XP12-201ENST00000461747 709 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 FTH1P11-201ENST00000517577 551 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 MIR3936-201ENST00000584304 110 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 AC099654.11-201ENST00000638857 294 ntBASIC4.73□□□□□ -1.65
HLA-DQB2P05538 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
HLA-DQB2P05538 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms