Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA1P02708 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CHRNA1P02708 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRNA1P02708 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CHRNA1P02708 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA1P02708 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRNA1P02708 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA1P02708 SNORA62-201ENST00000365493 153 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 U3.30-201ENST00000391308 210 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRNA1P02708 PTP4A1P1-201ENST00000420539 515 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 AC046176.1-201ENST00000435260 1170 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 RPL7AP61-201ENST00000443410 636 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC000111.2-201ENST00000448200 210 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 CEACAMP6-201ENST00000452007 574 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.37□□□□□ -1.55
CHRNA1P02708 RPL7AP10-201ENST00000481016 791 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 SCARNA22-201ENST00000503991 125 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC111000.3-201ENST00000508057 576 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 RFPL4AP5-201ENST00000514977 504 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 RN7SKP92-201ENST00000517266 244 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC034205.1-201ENST00000520621 638 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 OR5M2P-201ENST00000529003 936 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
CHRNA1P02708 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA1P02708 RPL26P30-202ENST00000602923 645 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 SNORA35B-201ENST00000607417 129 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA1P02708 AL049794.2-201ENST00000616301 365 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 AL022401.1-201ENST00000619498 108 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 MIR6758-201ENST00000620653 63 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 AC019206.1-201ENST00000621938 425 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CHRNA1P02708 TMEM30CP-203ENST00000637814 1035 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA1P02708 AC027228.2-201ENST00000567141 2154 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA1P02708 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.37□□□□□ -1.55
CHRNA1P02708 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA1P02708 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRNA1P02708 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRNA1P02708 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CHRNA1P02708 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 SMG1P7-201ENST00000565246 2704 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 AL590240.1-201ENST00000334118 313 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.36□□□□□ -1.55
CHRNA1P02708 RPS3AP23-201ENST00000401762 784 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 RNA5SP345-201ENST00000410646 108 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 RN7SKP106-201ENST00000410832 272 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 AC114755.2-201ENST00000413520 361 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 AC009480.2-201ENST00000422916 432 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 FTH1P2-201ENST00000466086 412 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.36□□□□□ -1.55
CHRNA1P02708 AC093267.1-201ENST00000489176 961 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.36□□□□□ -1.55
CHRNA1P02708 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.36□□□□□ -1.55
CHRNA1P02708 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.36□□□□□ -1.55
CHRNA1P02708 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 OR10D4P-201ENST00000525892 951 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHRNA1P02708 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 AC009852.2-201ENST00000567898 485 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 DPRXP4-201ENST00000578053 568 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 AC010424.2-201ENST00000607594 443 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 AC019193.2-201ENST00000610012 634 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 FAM27B-201ENST00000610601 213 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHRNA1P02708 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHRNA1P02708 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHRNA1P02708 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 AL022311.1-201ENST00000623726 19416 ntBASIC5.36□□□□□ -1.55
CHRNA1P02708 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CHRNA1P02708 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA1P02708 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA1P02708 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms