Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 ECM1P2-201ENST00000503354 1577 ntBASIC5□□□□□ -1.61
RIPK2O43353 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
RIPK2O43353 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 RNU6-603P-201ENST00000411403 107 ntBASIC5□□□□□ -1.61
RIPK2O43353 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5□□□□□ -1.61
RIPK2O43353 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 AC004938.1-201ENST00000438468 308 ntBASIC5□□□□□ -1.61
RIPK2O43353 AL354714.3-201ENST00000447284 493 ntBASIC5□□□□□ -1.61
RIPK2O43353 TCEA1P1-201ENST00000449716 880 ntBASIC5□□□□□ -1.61
RIPK2O43353 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5□□□□□ -1.61
RIPK2O43353 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5□□□□□ -1.61
RIPK2O43353 YRDCP3-201ENST00000456507 480 ntBASIC5□□□□□ -1.61
RIPK2O43353 APOOP2-201ENST00000461561 539 ntBASIC5□□□□□ -1.61
RIPK2O43353 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 RN7SL547P-201ENST00000490793 290 ntBASIC5□□□□□ -1.61
RIPK2O43353 DEFB109F-201ENST00000491870 277 ntBASIC5□□□□□ -1.61
RIPK2O43353 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
RIPK2O43353 EIF4A2P3-201ENST00000525903 1055 ntBASIC5□□□□□ -1.61
RIPK2O43353 TOMM20P1-201ENST00000534518 427 ntBASIC5□□□□□ -1.61
RIPK2O43353 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
RIPK2O43353 AC079075.1-201ENST00000559543 878 ntBASIC5□□□□□ -1.61
RIPK2O43353 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5□□□□□ -1.61
RIPK2O43353 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 AC090312.1-201ENST00000580637 348 ntBASIC5□□□□□ -1.61
RIPK2O43353 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5□□□□□ -1.61
RIPK2O43353 BMS1P7-201ENST00000602440 1052 ntBASIC5□□□□□ -1.61
RIPK2O43353 AC234782.5-201ENST00000617723 324 ntBASIC5□□□□□ -1.61
RIPK2O43353 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
RIPK2O43353 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RIPK2O43353 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RIPK2O43353 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5□□□□□ -1.61
RIPK2O43353 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RIPK2O43353 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 SYT14P1-202ENST00000600441 1448 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.99□□□□□ -1.61
RIPK2O43353 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RIPK2O43353 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.99□□□□□ -1.61
RIPK2O43353 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.99□□□□□ -1.61
RIPK2O43353 AC108075.1-201ENST00000424692 529 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 MTCO3P21-201ENST00000430791 643 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.99□□□□□ -1.61
RIPK2O43353 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.99□□□□□ -1.61
RIPK2O43353 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 IGHV5-78-201ENST00000450948 295 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.99□□□□□ -1.61
RIPK2O43353 RPL23AP37-201ENST00000479658 549 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 RPS4XP18-201ENST00000495480 763 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.99□□□□□ -1.61
RIPK2O43353 MTCO3P42-201ENST00000509488 518 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 PGBD4P4-201ENST00000509673 613 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.99□□□□□ -1.61
RIPK2O43353 MTCO3P39-201ENST00000514812 518 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 Y_RNA.719-201ENST00000517156 106 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AF186190.1-201ENST00000517470 480 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 NPM1P6-201ENST00000521088 871 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AC112191.2-201ENST00000522428 333 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.99□□□□□ -1.61
RIPK2O43353 AC024940.3-201ENST00000538551 316 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AC125612.1-201ENST00000547580 377 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.99□□□□□ -1.61
RIPK2O43353 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.99□□□□□ -1.61
RIPK2O43353 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.99□□□□□ -1.61
RIPK2O43353 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.99□□□□□ -1.61
RIPK2O43353 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.99□□□□□ -1.61
RIPK2O43353 AC138473.1-201ENST00000605717 526 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 uc_338.18-201ENST00000615451 175 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 MIR6071-201ENST00000616741 78 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 AC005086.4-201ENST00000623065 213 ntBASIC4.99□□□□□ -1.61
RIPK2O43353 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.99□□□□□ -1.61
RIPK2O43353 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.99□□□□□ -1.61
RIPK2O43353 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.99□□□□□ -1.61
RIPK2O43353 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RIPK2O43353 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
RIPK2O43353 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RIPK2O43353 DDX18P4-201ENST00000511690 1966 ntBASIC4.98□□□□□ -1.61
RIPK2O43353 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RIPK2O43353 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms