Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN3O15551 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 AL672167.1-204ENST00000641875 3017 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLDN3O15551 RN7SKP103-201ENST00000363848 320 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 RNU6-729P-201ENST00000384399 107 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 SNORA11B-201ENST00000408175 129 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN3O15551 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN3O15551 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN3O15551 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN3O15551 RPL35AP21-201ENST00000437667 333 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 AC234781.3-201ENST00000452540 973 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 AC091685.2-201ENST00000454924 864 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 RN7SL517P-201ENST00000462240 305 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 AC107015.1-201ENST00000466902 747 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 AC092324.1-201ENST00000468671 324 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 OR11I1P-201ENST00000486033 954 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 RN7SL591P-201ENST00000496150 292 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 RNA5SP392-201ENST00000516905 112 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 Y_RNA.719-201ENST00000517156 106 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN3O15551 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN3O15551 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN3O15551 AC006363.1-201ENST00000603806 463 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 AC010424.2-201ENST00000607594 443 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 FAM25E-202ENST00000608562 189 ntBASIC5.34□□□□□ -1.55
CLDN3O15551 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN3O15551 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN3O15551 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN3O15551 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN3O15551 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN3O15551 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CLDN3O15551 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN3O15551 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN3O15551 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CLDN3O15551 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.34□□□□□ -1.56
CLDN3O15551 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CLDN3O15551 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN3O15551 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CLDN3O15551 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN3O15551 AC008758.3-201ENST00000507003 1829 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN3O15551 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN3O15551 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN3O15551 RNA5SP345-201ENST00000410646 108 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN3O15551 AL139128.1-201ENST00000413921 941 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN3O15551 RBMY2KP-201ENST00000418221 992 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 OR5M12P-201ENST00000423388 929 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 AC006466.1-201ENST00000438721 289 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 AC000111.2-201ENST00000448200 210 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 AURKAPS2-201ENST00000454983 333 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 AL356390.1-201ENST00000455684 397 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN3O15551 AC063943.1-201ENST00000465434 453 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN3O15551 AC083982.1-201ENST00000485679 344 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN3O15551 AC026688.1-201ENST00000520639 1168 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN3O15551 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN3O15551 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN3O15551 MIR4480-201ENST00000582492 71 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 AC007497.1-201ENST00000610421 561 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN3O15551 AC132825.1-201ENST00000463573 2247 ntBASIC5.33□□□□□ -1.56
CLDN3O15551 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN3O15551 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN3O15551 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN3O15551 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN3O15551 HSPA8P14-201ENST00000552265 1805 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN3O15551 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN3O15551 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN3O15551 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLDN3O15551 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN3O15551 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN3O15551 ZNF652P1-201ENST00000442420 1309 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CLDN3O15551 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN3O15551 AL035419.1-201ENST00000397037 564 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN3O15551 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN3O15551 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN3O15551 AC092162.1-201ENST00000432828 434 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 AC008072.1-201ENST00000434254 824 ntBASIC5.32□□□□□ -1.56
CLDN3O15551 BTF3P6-201ENST00000448054 499 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms