Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RN7SL547P-201ENST00000490793 290 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 RPSAP51-201ENST00000497462 645 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC008427.1-201ENST00000503102 655 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC010374.1-201ENST00000503762 1237 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 OR5M14P-201ENST00000506803 618 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 ASNSP4-201ENST00000511103 447 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 AC139365.2-201ENST00000517972 253 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 MTCO1P47-201ENST00000523889 1271 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC012254.4-201ENST00000588843 273 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC008536.1-201ENST00000602872 669 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC012557.2-201ENST00000605919 418 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC090116.1-201ENST00000615679 446 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 MIR6133-201ENST00000617057 108 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC019226.2-201ENST00000625973 424 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC099654.8-201ENST00000637757 681 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC004158.1-201ENST00000564508 4319 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 AC109780.1-201ENST00000451768 1344 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TRIM38O00635 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 AP001029.2-203ENST00000589795 4910 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC011933.2-201ENST00000578539 2790 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TRIM38O00635 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TRIM38O00635 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM38O00635 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM38O00635 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM38O00635 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRIM38O00635 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM38O00635 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM38O00635 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM38O00635 RNU5B-4P-201ENST00000363508 111 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 SNORA74A-201ENST00000364089 198 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM38O00635 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM38O00635 MIR937-201ENST00000401271 86 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 RNU4-34P-201ENST00000410431 124 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 AP000534.2-201ENST00000412729 568 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 VTA1P1-201ENST00000414044 866 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC079809.1-201ENST00000415468 276 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 FABP5P3-201ENST00000437960 408 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM38O00635 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM38O00635 AL096803.2-201ENST00000450032 677 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AL606490.1-201ENST00000452266 765 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 RANP1-206ENST00000455094 651 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 MTCO2P6-201ENST00000463134 685 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM38O00635 TRAV31-201ENST00000502780 342 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 AC026414.1-201ENST00000504046 698 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC105313.1-201ENST00000509121 353 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC005351.1-201ENST00000511152 786 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 SNORA70.11-201ENST00000515987 138 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 SNORA70.13-201ENST00000516116 138 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM38O00635 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM38O00635 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM38O00635 AC044860.2-201ENST00000561005 179 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM38O00635 MIR548Y-201ENST00000582739 110 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM38O00635 AC063977.5-201ENST00000601044 974 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC023762.1-201ENST00000603280 584 ntBASIC5.63□□□□□ -1.51
TRIM38O00635 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms