Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL596275.2-207ENST00000641188 675 ntBASIC5.56□□□□□ -1.52
HMGB1P1B2RPK0 AL596275.2-204ENST00000641628 552 ntBASIC5.56□□□□□ -1.52
HMGB1P1B2RPK0 AL596275.2-206ENST00000641957 626 ntBASIC5.56□□□□□ -1.52
HMGB1P1B2RPK0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB1P1B2RPK0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HMGB1P1B2RPK0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGB1P1B2RPK0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB1P1B2RPK0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB1P1B2RPK0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AL034417.1-201ENST00000399343 800 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AL359643.1-201ENST00000404109 423 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 MIR1266-201ENST00000408125 84 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 MRPL53P1-201ENST00000414323 319 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 RPS15AP40-201ENST00000419621 391 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 GAPDHP19-201ENST00000431768 1005 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 RPS26P30-201ENST00000443431 335 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 RPL23AP15-201ENST00000450202 459 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 PPIAP7-201ENST00000454070 489 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 RPS20P21-201ENST00000466859 343 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AP003385.3-201ENST00000472498 287 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AC012170.1-201ENST00000495139 359 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 RPL15P21-201ENST00000495592 567 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 NIFKP7-201ENST00000503365 834 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 RN7SKP234-201ENST00000517173 224 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AP000620.1-201ENST00000527147 504 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 OR5AZ1P-201ENST00000527448 943 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AC135001.1-201ENST00000544546 283 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 BNIP3P1-201ENST00000547295 580 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AC027104.1-201ENST00000563702 681 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AC005191.1-201ENST00000603950 358 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 MIR6864-201ENST00000617935 70 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 AL136964.1-201ENST00000622038 2990 ntBASIC5.55□□□□□ -1.52
HMGB1P1B2RPK0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 DCAF13P1-201ENST00000495256 1330 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 RNU1-19P-201ENST00000363306 165 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 RNA5SP30-201ENST00000365552 115 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 UBBP2-201ENST00000376781 231 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 PRRC2CP1-201ENST00000404428 159 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL078604.1-201ENST00000404609 466 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL445183.3-201ENST00000414168 502 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 H2AFZP5-201ENST00000446960 382 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 DNAJC19P8-201ENST00000452887 259 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL645939.1-201ENST00000453429 797 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC104689.1-201ENST00000473356 768 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC087385.1-201ENST00000475062 312 ntBASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P1B2RPK0 AC097173.1-201ENST00000505862 819 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms