Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 RN7SKP153-201ENST00000365026 316 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 MIR589-201ENST00000385238 99 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 MIR1282-201ENST00000408865 101 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 RN7SKP286-201ENST00000410894 299 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 TCEA1P4-201ENST00000415066 844 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 EIF4A1P1-201ENST00000420241 934 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 NAP1L4P2-201ENST00000425958 899 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 RPS29P14-201ENST00000431518 171 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 RPL31P44-201ENST00000447680 377 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 PRPF38AP1-201ENST00000451976 933 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 RN7SL273P-201ENST00000481561 299 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 PPIAP19-201ENST00000486414 492 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 EIF1P7-201ENST00000487533 337 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC104629.1-201ENST00000494226 508 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC010627.1-201ENST00000503819 1294 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 POLR2KP1-201ENST00000553226 168 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC022404.1-201ENST00000555320 273 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC090888.3-201ENST00000558917 509 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC104229.1-201ENST00000561364 255 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC022884.2-201ENST00000578535 580 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC010487.1-201ENST00000594408 1172 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC005014.3-201ENST00000605985 190 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC112503.2-201ENST00000609005 552 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC093875.1-201ENST00000623688 504 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
SRRM4A7MD48 AP000756.2-201ENST00000624168 2567 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 AL592494.2-201ENST00000425455 1548 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 AC023421.1-201ENST00000590535 1785 ntBASIC4.25□□□□□ -1.73
SRRM4A7MD48 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SRRM4A7MD48 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SRRM4A7MD48 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC083843.2-201ENST00000568248 6253 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SRRM4A7MD48 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SRRM4A7MD48 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
SRRM4A7MD48 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SRRM4A7MD48 MTCO1P18-201ENST00000455518 1419 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC005294.1-201ENST00000355509 281 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC007618.1-201ENST00000366455 732 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 RNU6-178P-201ENST00000384631 104 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 RNA5SP487-201ENST00000410186 122 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 AL158050.1-201ENST00000416077 457 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC008173.1-201ENST00000418901 264 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AL512637.2-201ENST00000431287 1256 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 MED6P1-201ENST00000439659 713 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 RPL7P45-201ENST00000455851 743 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC079168.1-201ENST00000458741 345 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC008379.1-201ENST00000463655 464 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC100832.1-201ENST00000471945 383 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 RPL21P47-201ENST00000483696 477 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 COX6B1P2-201ENST00000489624 230 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 MTATP6P1-201ENST00000514057 681 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.24□□□□□ -1.73
SRRM4A7MD48 AC006518.1-201ENST00000541449 943 ntBASIC4.24□□□□□ -1.73
SRRM4A7MD48 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms