Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC093519.1-201ENST00000566109 298 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC012146.2-201ENST00000576545 416 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AL139286.1-201ENST00000604465 483 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 MIR7973-1-201ENST00000614683 76 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC012629.3-201ENST00000623397 328 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC112204.3-201ENST00000623822 332 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 FER-210ENST00000628534 558 ntTSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 AC007159.1-201ENST00000566529 4706 ntBASIC5.86□□□□□ -1.47
SHISA3A0PJX4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHISA3A0PJX4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 ASNSP1-204ENST00000641977 1664 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AL161912.4-201ENST00000623889 2468 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 Y_RNA.263-201ENST00000364659 114 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 Y_RNA.295-201ENST00000364918 102 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 U8.14-201ENST00000390843 143 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC090114.1-201ENST00000393266 448 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 MIR1231-201ENST00000408101 92 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 RNU4-55P-201ENST00000410731 137 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC116036.1-201ENST00000412199 367 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 ELOBP4-201ENST00000423418 296 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 BX890604.2-201ENST00000427883 474 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 PGBD4P3-201ENST00000440731 581 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 RN7SL213P-201ENST00000463482 317 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 ENPP7P3-201ENST00000509123 241 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC083906.1-201ENST00000509298 406 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AP005639.1-201ENST00000526939 192 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 OR5M6P-201ENST00000530227 937 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC090971.3-201ENST00000557871 1041 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 RN7SL25P-201ENST00000583862 260 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC005261.5-201ENST00000596280 355 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC103792.1-201ENST00000603591 919 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC004908.1-201ENST00000606572 541 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC012511.1-201ENST00000608140 449 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC106782.7-201ENST00000624024 418 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC133555.5-201ENST00000624430 418 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC021242.1-201ENST00000507315 2035 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AL021877.2-201ENST00000624442 10684 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 DDX18P4-201ENST00000511690 1966 ntBASIC5.85□□□□□ -1.47
SHISA3A0PJX4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHISA3A0PJX4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms