Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC104698.1-201ENST00000435671 276 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 TAAR7P-201ENST00000436141 242 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 EIF4A1P6-201ENST00000448133 1210 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 HIST1H2APS6-201ENST00000448609 364 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 ATP5G1P6-201ENST00000451206 412 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU6-420P-201ENST00000458780 107 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC008967.1-201ENST00000504843 163 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC106774.2-201ENST00000510266 406 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 SUMO2P7-201ENST00000511179 285 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 EIF3KP1-201ENST00000513279 656 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 SNORA81.2-201ENST00000516868 170 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 IGLV1-62-201ENST00000518003 441 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AP001429.1-201ENST00000602568 530 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC012065.3-201ENST00000602736 439 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 BCRP9-201ENST00000605312 388 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AL121809.2-201ENST00000613169 341 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AC068722.2-201ENST00000618734 544 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 AL121949.2-201ENST00000403446 1548 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 MTCO1P11-201ENST00000429111 1528 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 CASC19-284ENST00000642142 1868 ntBASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHGA11Q9Y5H2 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU1-149P-201ENST00000390870 161 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AL590762.1-201ENST00000391782 432 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 FDPSP5-201ENST00000399474 1057 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 SUMO2P13-201ENST00000403109 272 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC073900.1-201ENST00000429766 776 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC023347.2-201ENST00000433994 462 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 PSPC1P2-201ENST00000455130 225 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC117395.2-201ENST00000463122 1128 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 RPL21P71-201ENST00000465598 459 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AL355032.1-201ENST00000472981 438 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 RPL19P11-201ENST00000495944 589 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 GAPDHP38-201ENST00000503632 1002 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC139783.2-201ENST00000504847 1145 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 IGKV2-36-201ENST00000519999 223 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC093027.1-201ENST00000546698 429 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC011611.1-201ENST00000552179 197 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.99□□□□□ -1.29
PCDHGA11Q9Y5H2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms