Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 VN1R21P-201ENST00000426703 765 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 HIGD1AP12-201ENST00000427832 281 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL163193.1-201ENST00000444895 788 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 PTENP1-201ENST00000447117 1215 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 Z99714.1-201ENST00000450463 807 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 RN7SL799P-201ENST00000475891 298 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 RN7SL466P-201ENST00000497546 295 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC091860.1-201ENST00000505723 432 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC008083.2-201ENST00000546707 476 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC006530.1-201ENST00000555980 571 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 SETP1-201ENST00000556014 845 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC060780.2-201ENST00000589047 198 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL513327.3-201ENST00000602618 469 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC004948.1-201ENST00000609858 672 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AC092106.3-201ENST00000611308 722 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL356274.1-201ENST00000617064 410 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AL035661.1-201ENST00000620459 1144 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 AP003399.1-201ENST00000637534 361 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 MTND4P10-201ENST00000446199 1363 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.79□□□□□ -1.48
PCDHB1Q9Y5F3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 RNA5SP500-201ENST00000364486 119 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 SNORD116-8-201ENST00000384365 95 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 MIR525-201ENST00000384978 85 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 MIR105-2-201ENST00000385083 81 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC007394.1-201ENST00000421941 531 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 RPF2P1-201ENST00000424137 906 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC002504.1-201ENST00000438281 691 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 MRPL35P4-201ENST00000453682 566 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 RNU7-140P-201ENST00000459546 60 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 DUTP7-201ENST00000507982 486 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 ST13P12-201ENST00000508958 1094 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 snoZ278.1-201ENST00000517059 112 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC083923.1-201ENST00000523708 376 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 MTCO3P15-201ENST00000526563 574 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC125611.1-201ENST00000549563 229 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC023813.2-201ENST00000564321 469 ntBASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB1Q9Y5F3 AC091057.2-201ENST00000602594 792 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms