Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 SCARNA15-201ENST00000607520 4325 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 AC114947.2-201ENST00000565748 2125 ntBASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4BQ9Y4P1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AL645927.1-201ENST00000396783 406 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 MTCYBP29-201ENST00000436327 1006 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 KNOP1P3-201ENST00000446933 426 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC097484.1-201ENST00000471148 389 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 RPL7AP6-201ENST00000477943 801 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 RPL5P22-201ENST00000480199 884 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC008410.1-201ENST00000483777 339 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 OR8A2P-201ENST00000528631 952 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC087888.1-201ENST00000550884 1254 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC074029.2-201ENST00000551045 634 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC006349.1-201ENST00000555526 235 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC127024.5-201ENST00000580085 462 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC011447.4-201ENST00000587562 111 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC006116.3-201ENST00000592968 361 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AL445222.1-201ENST00000607259 628 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC020763.5-201ENST00000623298 430 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC104820.1-201ENST00000624183 307 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AC019080.5-201ENST00000624891 757 ntBASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4BQ9Y4P1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC011755.1-201ENST00000623763 2049 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 SNURFL-201ENST00000309296 343 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 SNORA58B-201ENST00000364259 136 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AL136116.2-201ENST00000404020 785 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 SNORA11B-201ENST00000408175 129 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC007394.1-201ENST00000421941 531 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 SETP10-201ENST00000424368 814 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AL606490.7-201ENST00000433136 191 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AL606490.8-201ENST00000441624 319 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC004980.3-201ENST00000447046 365 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 RN7SL329P-201ENST00000467740 299 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC037198.2-201ENST00000478845 733 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC109462.1-201ENST00000491087 368 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 RN7SL808P-201ENST00000496066 299 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC010350.1-201ENST00000504908 231 ntBASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG4BQ9Y4P1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms