Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC093535.2-201ENST00000624769 2326 ntBASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KCNIP3Q9Y2W7 DDX18P5-201ENST00000534547 1306 ntBASIC4.21□□□□□ -1.73
KCNIP3Q9Y2W7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
KCNIP3Q9Y2W7 CASC19-206ENST00000641028 1430 ntBASIC4.21□□□□□ -1.73
KCNIP3Q9Y2W7 AC012020.1-201ENST00000624541 1728 ntBASIC4.21□□□□□ -1.73
KCNIP3Q9Y2W7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 RPA2P2-201ENST00000419698 796 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 OR6K4P-201ENST00000423179 955 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 FABP7P2-201ENST00000429946 379 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC069154.1-201ENST00000432914 542 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 OTX2P1-201ENST00000450956 354 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC104634.1-201ENST00000452720 462 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AL121877.1-201ENST00000453704 622 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AL445433.1-201ENST00000457507 257 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 RN7SL443P-201ENST00000464331 290 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 CCDC75P1-201ENST00000469247 791 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 VWA8P1-201ENST00000510889 176 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 NDUFB4P12-201ENST00000513465 390 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC034244.2-201ENST00000514668 858 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 RNA5SP271-201ENST00000516700 88 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 BTG1P1-201ENST00000540396 508 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 HMGB3P26-201ENST00000560051 582 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AC005021.1-201ENST00000608730 355 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 CASC19-284ENST00000642142 1868 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 AL133268.1-201ENST00000405676 1401 ntBASIC4.21□□□□□ -1.74
KCNIP3Q9Y2W7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC107027.3-201ENST00000565095 3473 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AL445487.1-201ENST00000415694 1580 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 RNA5SP319-201ENST00000362768 119 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 SNORA2.3-201ENST00000383920 135 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AL034374.1-201ENST00000406329 351 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 RPL23AP48-201ENST00000406913 488 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC007563.3-201ENST00000433233 371 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 CACYBPP1-201ENST00000438592 684 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 RPL7AP61-201ENST00000443410 636 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 CASP3P1-201ENST00000446037 609 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC243772.1-201ENST00000451620 410 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC011476.1-201ENST00000466725 307 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 RPS26P39-201ENST00000469206 341 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC096741.1-201ENST00000472250 846 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AP002884.1-201ENST00000479691 655 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 RPL9P15-201ENST00000491096 532 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 STMN1P2-201ENST00000508435 439 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC021146.3-201ENST00000511911 260 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms