Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RN7SL329P-201ENST00000467740 299 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 RN7SL222P-201ENST00000476452 299 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC004263.1-201ENST00000479327 332 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC093270.2-201ENST00000486157 792 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC072052.1-201ENST00000496556 306 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 MTND4P33-201ENST00000556706 766 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC090888.2-201ENST00000559765 1144 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC095057.3-201ENST00000567102 1157 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 RBM22P1-201ENST00000578589 1214 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 AL121612.2-201ENST00000612261 482 ntBASIC6.3□□□□□ -1.4
VTA1Q9NP79 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VTA1Q9NP79 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.3□□□□□ -1.4
VTA1Q9NP79 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VTA1Q9NP79 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 RNU6-185P-201ENST00000384421 107 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 RNA5SP91-201ENST00000390902 119 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 SNORD65C-201ENST00000390962 71 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 RPS27AP11-201ENST00000402798 447 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC092638.1-201ENST00000411966 1275 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 RPS7P9-201ENST00000414704 586 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 RPL23AP27-201ENST00000415161 451 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 USP9YP11-201ENST00000427537 717 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 HIGD1AP4-201ENST00000430194 280 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 MTND5P25-201ENST00000430499 799 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 RPS27P18-201ENST00000431701 247 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 OR52B5P-201ENST00000435337 951 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 AL353093.1-201ENST00000441292 436 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC105399.1-202ENST00000447303 205 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 NAP1L1P3-201ENST00000462291 880 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 RPS7P6-201ENST00000485777 579 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC231760.1-201ENST00000498002 260 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 snoU109.5-201ENST00000516231 132 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 HIGD1AP18-201ENST00000520730 278 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 OR5AK3P-201ENST00000527486 1297 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC006518.2-201ENST00000542513 940 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 BLZF2P-201ENST00000553776 1130 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 GAS5-AS1-201ENST00000602767 694 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 AL138478.1-201ENST00000612252 832 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 RPSAP73-201ENST00000614820 330 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AC010975.3-201ENST00000618727 978 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 AP002791.1-201ENST00000623291 381 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 OR52B5P-202ENST00000641118 1110 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 MTND4P8-201ENST00000514997 1362 ntBASIC6.29□□□□□ -1.4
VTA1Q9NP79 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.29□□□□□ -1.4
VTA1Q9NP79 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VTA1Q9NP79 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.28□□□□□ -1.4
VTA1Q9NP79 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
VTA1Q9NP79 RN7SKP186-201ENST00000365371 303 ntBASIC6.28□□□□□ -1.4
VTA1Q9NP79 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms